Gene Pden_3724 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3724 
Symbol 
ID4582276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp872490 
End bp873362 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content66% 
IMG OID639771034 
Productresponse regulator receiver protein 
Protein accessionYP_917487 
Protein GI119386432 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.954342 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.199959 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCTTC TGAAAGACAT CGAGATCATC CTGGCGGCGC GTTCGACGGC GGCGGTCTGG 
CAACATTATT TCGCGCGACT GGCCAGCCTG GGTTTTCCCA ATGTGTCCTA CCGTGCGGTG
CGGATTCTCG AGCCGCCCTG TGGGCGGATG CTTGACGATG GTGTGCTTCT TTCCAGCTAT
TCGCCGTATC TGATGCAGGA GCTTGCTTCG CTGGATCTGT TCGAAAGCGC GCCGATGCAT
CGATGGATCA TCCAGAACAG GGGCAGCGAA AGCTGGGACT GGATGCAGCG ATGCCGGCTG
GCCGGACGCC TGAGCCCGCG GGAGGAGCGC GCGATGGACG TTTTCGCCCG CTACGGCCAT
GTCGCCGGCT ATGCGGTCGG CATGGGCGAC GATGTGGAGC GGATCCGCGC CGGGGTGATC
GTCAGCGGCA CGATCGGGAT GCGGCAGGAC CGGCTGGACG CGCTTTGGGC ACAGCATGGC
CGCCTTGTCG GGGCGCTGAG CGGGGTCATG CACCTGCGCA TCTCGACCCT GCCTCATGCC
GAGCGCGAAT GCGTCCTGAC GCTGCGGCAG CGCGAGGTGC TGGAATGCAT CTCGGCCGGG
CATACCACGC AGGAGATCGC CCAGATCCTG GAGGTGACCC CGGCCACGGT GGAAAAGCAT
CTGCGGCTGG CGCGCAGGGC GCTGGGGGCA AAGACTACAG CCCAGGCAAT CCTGCTGGCC
GCCAGCAGCA AGCAGATCTC AGGTTCCGCC GCAGAGTCGC GCAAGATACC GGAGAATCGC
CCATTCGACC TTCCCTCGCC GGGAACGGAA AACGGGCATG GCCATGGCAT CCGGCGGGTG
GCCGTGGCGC CCGCGGTCTG CCGGGCGATC TGA
 
Protein sequence
MELLKDIEII LAARSTAAVW QHYFARLASL GFPNVSYRAV RILEPPCGRM LDDGVLLSSY 
SPYLMQELAS LDLFESAPMH RWIIQNRGSE SWDWMQRCRL AGRLSPREER AMDVFARYGH
VAGYAVGMGD DVERIRAGVI VSGTIGMRQD RLDALWAQHG RLVGALSGVM HLRISTLPHA
ERECVLTLRQ REVLECISAG HTTQEIAQIL EVTPATVEKH LRLARRALGA KTTAQAILLA
ASSKQISGSA AESRKIPENR PFDLPSPGTE NGHGHGIRRV AVAPAVCRAI