Gene Pden_3714 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3714 
Symbol 
ID4582266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp862835 
End bp863545 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content69% 
IMG OID639771024 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_917477 
Protein GI119386422 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.103402 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCAGCCTT GCTCAAGGGG CTTGCGCAGG GCCGCAGCCG ATGCGAAATC GACGGCCATG 
ACCGAGCATG ACAAAATCGC GCTGATCACC GGCGCCTCGC GCGGCCTCGG CGCCGCTTTG
GCCGAAACGC TTGCCGCGCG CGGCTGGCAC ATCCTGGCCG TCGCCCGCAC CACCGGCGCG
CTGGAAGAAC TGGACGACCG CATCCGCAAG GCCGGCGGCT CGGCCACGCT GGCACCGATG
GATGTCGGCC AGCCCGAGGC CATGGTGCAG ATGGCGCGGG CCGTGATGGA ACGCTGGGGC
GGGCTGGATC TTTGGGCGCA TACGGCGATC CATGCCGCAC CGCTGTCGCC TGCCGGCCAT
ATCGACGCCA AGGATTTCCA GAAATCGGTC GATCTGAACA TCGTCGCCAC GCGCGGGCTG
ATCAACCTGA TCGAGCCGCT CTTGCGCGCC CGCAAGGGCA CGGCGCTGTT CTTCGACGAC
AAGCGCGCGG GGCAGAAATT CTTCGGCAGC TATGGCGCGA CCAAGGCCGG CCAGATCGCC
CTGGCCCAAA GCTGGCGGGC CGAGAACGCC TCTCTCGGGC CCCGCGTCGT CATTGCCGAG
CCGGCGCCGA TGCCGACGGC CGTGCGCGCG CGCTTTTTCC CGGGCGAGGA TCGCGCGAAG
CTGACCCCCT GCCAGACCGA GGCCGAGCGA ATCCTGGCGG AAATCCTCTA G
 
Protein sequence
MQPCSRGLRR AAADAKSTAM TEHDKIALIT GASRGLGAAL AETLAARGWH ILAVARTTGA 
LEELDDRIRK AGGSATLAPM DVGQPEAMVQ MARAVMERWG GLDLWAHTAI HAAPLSPAGH
IDAKDFQKSV DLNIVATRGL INLIEPLLRA RKGTALFFDD KRAGQKFFGS YGATKAGQIA
LAQSWRAENA SLGPRVVIAE PAPMPTAVRA RFFPGEDRAK LTPCQTEAER ILAEIL