Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_3714 |
Symbol | |
ID | 4582266 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | - |
Start bp | 862835 |
End bp | 863545 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639771024 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_917477 |
Protein GI | 119386422 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.103402 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCAGCCTT GCTCAAGGGG CTTGCGCAGG GCCGCAGCCG ATGCGAAATC GACGGCCATG ACCGAGCATG ACAAAATCGC GCTGATCACC GGCGCCTCGC GCGGCCTCGG CGCCGCTTTG GCCGAAACGC TTGCCGCGCG CGGCTGGCAC ATCCTGGCCG TCGCCCGCAC CACCGGCGCG CTGGAAGAAC TGGACGACCG CATCCGCAAG GCCGGCGGCT CGGCCACGCT GGCACCGATG GATGTCGGCC AGCCCGAGGC CATGGTGCAG ATGGCGCGGG CCGTGATGGA ACGCTGGGGC GGGCTGGATC TTTGGGCGCA TACGGCGATC CATGCCGCAC CGCTGTCGCC TGCCGGCCAT ATCGACGCCA AGGATTTCCA GAAATCGGTC GATCTGAACA TCGTCGCCAC GCGCGGGCTG ATCAACCTGA TCGAGCCGCT CTTGCGCGCC CGCAAGGGCA CGGCGCTGTT CTTCGACGAC AAGCGCGCGG GGCAGAAATT CTTCGGCAGC TATGGCGCGA CCAAGGCCGG CCAGATCGCC CTGGCCCAAA GCTGGCGGGC CGAGAACGCC TCTCTCGGGC CCCGCGTCGT CATTGCCGAG CCGGCGCCGA TGCCGACGGC CGTGCGCGCG CGCTTTTTCC CGGGCGAGGA TCGCGCGAAG CTGACCCCCT GCCAGACCGA GGCCGAGCGA ATCCTGGCGG AAATCCTCTA G
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Protein sequence | MQPCSRGLRR AAADAKSTAM TEHDKIALIT GASRGLGAAL AETLAARGWH ILAVARTTGA LEELDDRIRK AGGSATLAPM DVGQPEAMVQ MARAVMERWG GLDLWAHTAI HAAPLSPAGH IDAKDFQKSV DLNIVATRGL INLIEPLLRA RKGTALFFDD KRAGQKFFGS YGATKAGQIA LAQSWRAENA SLGPRVVIAE PAPMPTAVRA RFFPGEDRAK LTPCQTEAER ILAEIL
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