Gene Pden_3690 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3690 
Symbol 
ID4582242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp839356 
End bp840114 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content71% 
IMG OID639771000 
Producthypothetical protein 
Protein accessionYP_917453 
Protein GI119386398 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0767] ABC-type transport system involved in resistance to organic solvents, permease component 
TIGRFAM ID[TIGR00056] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACCCGA TCCGGCTGAC CGGCAGGGCG GCGATCGGCC TGACCCGGAT GACCGGGCAG 
GTGACGATCT TTGCCGCACG CGGTCTGGCC CGGGTCGGGC AACATCCGGC GGAACTGGCG
CGGCAGGTCG TGCAGATCGG CTGGCTCTCG CTGCCGGTGG TCGGGCTGAC GGCGCTGTTC
ACCGGCGCGG CGCTGGCCTT GCAGATCCAT TCCGGGGGCG AGCGCTTCCA GGCCGGCGAC
GTGGTGCCCG CCATCGTCGC CATCGGCATG GCGCGCGAGC TTGGCCCGGT GCTGGGCGGG
CTGATGGTCG CGGCCCGCGT CGCCAGCGCC ATCGCGGCAG AGCTGGGCAC CATGCGCGTG
ACCGAGCAGA TCGACGCGCT GGTGACGCTT TCGACCGATC CCGTGGGCTG GCTGGTCTCG
CCCCGGCTGT GGGCGGCGCT GCTCTGCGTC CCGATGCTGG TGGGCGTGGG CGACGTGATC
GGCATCATGG GCGGCTGGCT GATCGGAGTG AACGCGCTGG GGTTCAACTC GGCCATCTAC
CTGTCCAATT CCTGGGCCTA TCTGGAAAGC TGGGACGTTG TCTCGGGCCT GCTCAAGGGC
GCGGTCTTCG GGCTGATCGT GGCGCTGTCG GGCTGCTGGT TCGGCATGAC GGCGGCCGGG
GGTGCCGCGG GCGTCGGGCG GGCGACGACC AATGCCGTGG TCGCGGCCTC GGTCGGTATC
CTGGCCGCCA ATTTCGCGCT GACGGGGCTG TTCTTCTGA
 
Protein sequence
MNPIRLTGRA AIGLTRMTGQ VTIFAARGLA RVGQHPAELA RQVVQIGWLS LPVVGLTALF 
TGAALALQIH SGGERFQAGD VVPAIVAIGM ARELGPVLGG LMVAARVASA IAAELGTMRV
TEQIDALVTL STDPVGWLVS PRLWAALLCV PMLVGVGDVI GIMGGWLIGV NALGFNSAIY
LSNSWAYLES WDVVSGLLKG AVFGLIVALS GCWFGMTAAG GAAGVGRATT NAVVAASVGI
LAANFALTGL FF