Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_3677 |
Symbol | |
ID | 4582229 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | + |
Start bp | 825257 |
End bp | 825901 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639770987 |
Product | GntR family transcriptional regulator |
Protein accession | YP_917440 |
Protein GI | 119386385 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGTTA CGCGTTCCTC GGAAAGTTCG GCCCATGAGC GGCTTTATCG CAACCTGCGC CAGCGCATCA TGCTGGGCGA ACTGCCGCCG GGGCTGCCCC TGACCCTGCG CGGCATCGCC GCCGAGCATC GCGTCTCGAT GACCCCCGCG CGCGAGGCGG TGCGCCGTCT GGTGGCCGAA GGGGCGCTGT CGCTCTCCTC CTCGGGGCGG ATCGCCACGC CGGAACTGTC GGTCGAGCGG ATCGAGGAAC TGGCCGCCCT GCGCGGGCTC ATCGAGCCGG AACTGGCCGC TCGCGCCTTG CCGCGCGCCC ACCAGGCGCT GATCGAGCGC ATGGCCGTCA TCAACGCCGC CATCGGCGAG GCGGCCGAGC GTCACGACGC CGTGGGCTAC ATCCGCACCA ATCTGGAGTT CCACCGCCTG CTTTACCTGC GTGCCCAGGC CCCGGCGATG CTGGCCATCG TCGAGACGGT CTGGCTGCAG CTTGGCCCGA CCATGCGGGC GCTGTACGGG CGGATGAAGC GCAACGAACC GCCGCGCCAT CACCGCATGA TCCTGGCCTC GCTGCGGGCC GGGGATGAGC CGGGGCTGCG GCTGGCGGTC CGCGCCGATG TGACGCATGG GCTGCGCCAT CTCGGCAGCG CCTGA
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Protein sequence | MTVTRSSESS AHERLYRNLR QRIMLGELPP GLPLTLRGIA AEHRVSMTPA REAVRRLVAE GALSLSSSGR IATPELSVER IEELAALRGL IEPELAARAL PRAHQALIER MAVINAAIGE AAERHDAVGY IRTNLEFHRL LYLRAQAPAM LAIVETVWLQ LGPTMRALYG RMKRNEPPRH HRMILASLRA GDEPGLRLAV RADVTHGLRH LGSA
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