Gene Pden_3677 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3677 
Symbol 
ID4582229 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp825257 
End bp825901 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content71% 
IMG OID639770987 
ProductGntR family transcriptional regulator 
Protein accessionYP_917440 
Protein GI119386385 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGTTA CGCGTTCCTC GGAAAGTTCG GCCCATGAGC GGCTTTATCG CAACCTGCGC 
CAGCGCATCA TGCTGGGCGA ACTGCCGCCG GGGCTGCCCC TGACCCTGCG CGGCATCGCC
GCCGAGCATC GCGTCTCGAT GACCCCCGCG CGCGAGGCGG TGCGCCGTCT GGTGGCCGAA
GGGGCGCTGT CGCTCTCCTC CTCGGGGCGG ATCGCCACGC CGGAACTGTC GGTCGAGCGG
ATCGAGGAAC TGGCCGCCCT GCGCGGGCTC ATCGAGCCGG AACTGGCCGC TCGCGCCTTG
CCGCGCGCCC ACCAGGCGCT GATCGAGCGC ATGGCCGTCA TCAACGCCGC CATCGGCGAG
GCGGCCGAGC GTCACGACGC CGTGGGCTAC ATCCGCACCA ATCTGGAGTT CCACCGCCTG
CTTTACCTGC GTGCCCAGGC CCCGGCGATG CTGGCCATCG TCGAGACGGT CTGGCTGCAG
CTTGGCCCGA CCATGCGGGC GCTGTACGGG CGGATGAAGC GCAACGAACC GCCGCGCCAT
CACCGCATGA TCCTGGCCTC GCTGCGGGCC GGGGATGAGC CGGGGCTGCG GCTGGCGGTC
CGCGCCGATG TGACGCATGG GCTGCGCCAT CTCGGCAGCG CCTGA
 
Protein sequence
MTVTRSSESS AHERLYRNLR QRIMLGELPP GLPLTLRGIA AEHRVSMTPA REAVRRLVAE 
GALSLSSSGR IATPELSVER IEELAALRGL IEPELAARAL PRAHQALIER MAVINAAIGE
AAERHDAVGY IRTNLEFHRL LYLRAQAPAM LAIVETVWLQ LGPTMRALYG RMKRNEPPRH
HRMILASLRA GDEPGLRLAV RADVTHGLRH LGSA