Gene Pden_3616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3616 
Symbol 
ID4582168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp770524 
End bp771156 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content70% 
IMG OID639770926 
Producthypothetical protein 
Protein accessionYP_917379 
Protein GI119386324 
COG category[S] Function unknown 
COG ID[COG2860] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.636133 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGTCG AGGCGCTGGT CCCGCTGCTG GATTACGCCA GCGTACTGGT CTTTGCGCTG 
ACCGGCGCGC TGGTGGCGAG CCGCGGGCAG CTTGATGTGG TCGGCTTCAT CTTCTTCGCC
ACGCTGACCG GGATCGGCGG CGGCACCTTG CGCGACCTGG TGCTGGGCCG GGCGCCGGTC
TTCTGGGTCG GGCGGCCCGA GCTTTTGCTG CTGACCGCCG GGGCTGCGAT CATGGTGTTC
TTTACCGCGC ATCGGCTGGA GAGCCGTTAT CGCGCCATCC TGTGGCTGGA TGCCTTTGCC
CTGGCGGTCG CGGTGCCGGC CGGGGTCGGC GTGGCGCTGG AGGCGGGGGT CAGCCCGGTG
GTCACGGTGC TGATGGGGGT AATGACCGGC ACCTTCGGCG GGCTGATGCG CGACGTGGTC
GGCAACGAGG TGCCGCTGGT GCTGAAACAG GGCGAGCTTT ACGTCACCGC CGCCTTTGGC
GGAGCGGTGG CGGCGCTGCT GTTGCTGACG CTTGGCACCG AGCGCGGCTG GGCGCTGATC
GGCTGCGCGG CGGTGGTGCT GCTGTTGCGT GCCGGGGGCA TGAGCTTCGG ATGGCGGCTG
CCGGTCTACA AGGCGCGGCC ACCGCGGCGC TAG
 
Protein sequence
MNVEALVPLL DYASVLVFAL TGALVASRGQ LDVVGFIFFA TLTGIGGGTL RDLVLGRAPV 
FWVGRPELLL LTAGAAIMVF FTAHRLESRY RAILWLDAFA LAVAVPAGVG VALEAGVSPV
VTVLMGVMTG TFGGLMRDVV GNEVPLVLKQ GELYVTAAFG GAVAALLLLT LGTERGWALI
GCAAVVLLLR AGGMSFGWRL PVYKARPPRR