Gene Pden_3582 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3582 
Symbol 
ID4582135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp733985 
End bp734776 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content66% 
IMG OID639770893 
Productresponse regulator receiver protein 
Protein accessionYP_917346 
Protein GI119386291 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGGGC GTGACCTGGC GCATGCATTG GCCGGTCTGT TCGGCGCGAC CGGGACGGAC 
GGATATGGCG CGGCGCTGGA TCGGCTGACC CGCATCGGCG CGGATTTCGA CATGAGCTGC
ATCTTCGGCT TCTCGACCTC GAAGCCGCCG GCGGTGATCC ACGACGGCTA TAGCGAGACG
GTGGATCGCC GGGCGCTGCG CTCCTACCTG CGGGGCGCCT ATCTTCTGGA CCCTTTCTAT
GCCGCGAGCA TCGGCGCGAC GGCCGAGGGC CTGTGGCGGA TGCGCGATCT GGCGCCCGAT
GCATATTACG ACGCCGAGTT CGCCTGGTCG CAGGAGGTCC ATCCCTGCAT CTCGGACCAG
GCGGGTACGC TGGTCGAGGA GATCGGCTAT ATCATCCCGC TTTCGGACGG GTTCGCGGCC
ACCTATTCGC TGATGCGCAA TCGCGGCGGC ACCTGCTTCG ACGAGGCCGA GGCGGCGCGC
TTGCAGGAGC TGCTGCCCGT CATTGCAGCC AGCCTGCGCC TGCACTGGAA CGTCTCGCAA
AACGGGGAAC AGGCGGGCGG TCCCGCGCCG GACAGCGAAG AGGTTCTGCG CGCCGCCTTC
AGCGCGCTGA CGCCCGCCCA GCAGGCGGTG ACCAAGCTGA TCCTGCGCGG GCACAGCAAC
ATCTCGATTG CCGAGAACCT CGGGATAACC GAGGGCACGG TGAAGCTGCA TCGCTACAAC
ATCTACAAGC GGCTTGAAAT CTCCAGCCAG GCCGAGCTGT TCCAGCGCTT CATCGATTTC
CTCGGCAAAT AG
 
Protein sequence
MIGRDLAHAL AGLFGATGTD GYGAALDRLT RIGADFDMSC IFGFSTSKPP AVIHDGYSET 
VDRRALRSYL RGAYLLDPFY AASIGATAEG LWRMRDLAPD AYYDAEFAWS QEVHPCISDQ
AGTLVEEIGY IIPLSDGFAA TYSLMRNRGG TCFDEAEAAR LQELLPVIAA SLRLHWNVSQ
NGEQAGGPAP DSEEVLRAAF SALTPAQQAV TKLILRGHSN ISIAENLGIT EGTVKLHRYN
IYKRLEISSQ AELFQRFIDF LGK