Gene Pden_3578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3578 
Symbol 
ID4582131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp730346 
End bp731278 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content65% 
IMG OID639770889 
Producthypothetical protein 
Protein accessionYP_917342 
Protein GI119386287 
COG category[S] Function unknown 
COG ID[COG3246] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTCA ACGGAAAAGT CATCATCACC TGCGCCGTGA CAGGTGCGAT CCACACGCCG 
TCCATGTCGC CCTATCTGCC GGTCTCGGCC TCGGAAATCA CGGATGCGGC CATCGGTGCG
GCAGAGGCGG GGGCGGCCGT CATCCACCTG CACGCCCGCC ATGAAGGCGA TGGCAGCCCC
GACCAGAGCG TCGAGGCGTT CAACCCCATC CTCGGCGTGA TCAAGCAGGC GAGCGACGCC
GTGCTGAACA TCACCACCGG CGGCGCGCCG ACCATGAGCA TCGCCGAACG CATCCAGCCC
GCGCAGCATT ACCGACCCGA GCTTGCCTCG CTGAACATGG GGACGATGAA TTTCGGCCTG
TTCCCCATGC TCAACCGCTA CGAATCCCAG CTCAAGCACC AGTGGGAGCG GAATTATCTG
GGCAACAAGG ACATCATCTT CCGCAATACC TTCGGCGACG TGGAACATGT CATGACCACG
CTTGGCGCGG GGGGCACGCG GTTCGAGTTC GAATGCTACG ACACCTCGCA TCTTTATAAC
CTCAAGCATT TCTACGACCG CGGGCTGGTC AAGGGGCCGC TGTTCATTCA GACGGTCTTT
GGCCTGATGG GCGGGATCGG CGCGCATCCC GACGACGTGC TGCACATGAA GCGCACCGCC
GACCGGCTGT TCGGCCAGGA TTACCGCTGG TCGGTGCTGG GCGCCGGGCG CAACCAGCTC
AATATCGCGG CCATGTCGGC GGCGATGGGC GGGCATGTCC GCGTCGGGCT GGAGGACAAC
CTCTGGGCGG GCAAGGGCCG TCTGGCGGAA ACCAACGCCC AGCAGGTCCG CGCCGCGCGC
CAGATCGTCG AGGGGCTGGG CCTTGAGGTC GCGACCCCAG CCGAGGCGCG CGAGCTGCTG
GCGCTAAAGG GTGGCGATCA GGTCAATTTC TAA
 
Protein sequence
MSLNGKVIIT CAVTGAIHTP SMSPYLPVSA SEITDAAIGA AEAGAAVIHL HARHEGDGSP 
DQSVEAFNPI LGVIKQASDA VLNITTGGAP TMSIAERIQP AQHYRPELAS LNMGTMNFGL
FPMLNRYESQ LKHQWERNYL GNKDIIFRNT FGDVEHVMTT LGAGGTRFEF ECYDTSHLYN
LKHFYDRGLV KGPLFIQTVF GLMGGIGAHP DDVLHMKRTA DRLFGQDYRW SVLGAGRNQL
NIAAMSAAMG GHVRVGLEDN LWAGKGRLAE TNAQQVRAAR QIVEGLGLEV ATPAEARELL
ALKGGDQVNF