Gene Pden_3556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3556 
Symbol 
ID4582111 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp707372 
End bp708448 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content65% 
IMG OID639770869 
ProductN-acylneuraminate-9-phosphate synthase 
Protein accessionYP_917322 
Protein GI119386267 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2089] Sialic acid synthase 
TIGRFAM ID[TIGR03586] pseudaminic acid synthase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.434108 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCT TGCGGGAAGA ACTTTTGCCC GGGAATAAGG GGAACCGCCC CTTCATCATC 
GCCGAGATGT CGGGCAACCA TAACGCTTCC CTCGACAAGG CGCTGGCCAT CATCGATGCC
GCCGCCGATG TCGGCGCCGA TGCGATCAAG ATCCAGACCT TCACCGCCGA CAGCATGACG
CTTGACCTCG ATGAGGGCGA GTTCAGTATC CGCGATCCGA AATCGCTCTG GTTCGGCCGG
CGGCTCTACG ACCTCTACCA GGAAGCGATG ACGCCTGCCG ACTGGCACAA GCCGATCTTC
ACGCGCGCGA AAGAGCGGGG CATCCTGTGC TTCTCCACGC CCTTCGACGA GGCGGCGGTG
GACCTGCTGG AAGACCTCGG CGCCCCGGCC TACAAGGTTG CCTCCTTCGA GGCGGTGGAC
CTGCCGCTGA TCCGCTATGT CGCCGCCACG AAAAAGCCGC TGATTATCTC GACAGGGATG
GCCACGATCG GCGAGATCGA CGAGGCGGTG GAGGCGGCAC TCTCGGCCGG CTGCACCAAC
CTCACTTTGC TGAAATGTAC CTCGAGCTAT CCGGCCTCTC CCGAGAACAC CAACCTGCTG
ACCATGCCGC AGATCGGCGC CACCTTCGGG GTGAACTTCG GCCTGTCGGA CCATACGCTG
GGGGTAGGAG TGTCGGTCGC CGCCACCGCG CTCGGCGCCA GCGTGATCGA GAAGCATTTC
ATCCTGGACC GCAGCGAAGG CGGCGTGGAT TCAGCCTTCT CGCTGGAGCC CGGGGAATTC
CGCCTTCTGG TCGACGAGAC CACCCGCGCC GCGCAGTCGC TGGGCCGCGT CCATTTCGGC
GGCACCGCTT CGGAGCAGGC AGGCAGGCGC AAGCGACGCT CGCTCTATAT CGGGCAGGAC
ATGAAGGCGG GCGACATCCT GACCCCGGCC AATCTGCGCC GCATCCGCCC CGGATCCGGG
CTCGCCCCGC GCCATTACGA CATGCTGCTC GGCCGCCGGC TGGGACGCGA CGCCGCGAAG
GGCACGCCGA TGAGCTGGGA TCTTCTGGAA GGGCATTCCG ACACGGAGGG GATCTGA
 
Protein sequence
MKTLREELLP GNKGNRPFII AEMSGNHNAS LDKALAIIDA AADVGADAIK IQTFTADSMT 
LDLDEGEFSI RDPKSLWFGR RLYDLYQEAM TPADWHKPIF TRAKERGILC FSTPFDEAAV
DLLEDLGAPA YKVASFEAVD LPLIRYVAAT KKPLIISTGM ATIGEIDEAV EAALSAGCTN
LTLLKCTSSY PASPENTNLL TMPQIGATFG VNFGLSDHTL GVGVSVAATA LGASVIEKHF
ILDRSEGGVD SAFSLEPGEF RLLVDETTRA AQSLGRVHFG GTASEQAGRR KRRSLYIGQD
MKAGDILTPA NLRRIRPGSG LAPRHYDMLL GRRLGRDAAK GTPMSWDLLE GHSDTEGI