Gene Pden_3549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3549 
Symbol 
ID4582104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp697602 
End bp698237 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content70% 
IMG OID639770862 
Productmaleylacetoacetate isomerase 
Protein accessionYP_917315 
Protein GI119386260 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID[TIGR01262] maleylacetoacetate isomerase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.155498 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.276406 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGTCG TGCTGCACGA CTACTGGCGA TCCTCCGCAT CCTACCGGGT GCGGATCGCG 
CTGGCGCTGA AGGGTATTGC CTACGACCGG GTGGCGGTGG ATCTGGTGGC CGGTGCGCAG
CGGCGCGCGG ATCATCTGGC GCTGAACCCG CAGGGGCTGG TGCCGGTGCT GGAGATCGAC
GGGCTGCGGC TGACGCAGTC GCTGGCGATC CTGGAATACC TCGAGGAAAC CCGGCCGCAG
CCGGCGCTGC TGCCCGAAGG TGCGGCGGCG CGGGCGCATG CCCGGGCGTT GGCGCTGGCG
GTGGCCTGCG AGATCCATCC GCTCTCGAAT CTGGGGGTGC TGGCGCGGGT GGAGGCATTG
GCCGGACCCG AGGCGCGCGC CGCCTGGAAC CGCGAGAACA TCGCCCGCGG CCTTGAGGCC
GTCGAGCGGC TGCTGGACCA TCCGGGCTTT GCCGGGCGGT TCTGCCATAG CGACAGGCCG
GGCATGGCCG ATTGCGTGCT GATCCCGCAG ATCTACAACG CCAGCCGCTG GGGGGTGGAG
TTCCGACACC TGCCGCGCAT CGCCGCCGTT GCATCGTCCT GCTCGGATTT GGCGGCATTC
CAGATGGCCG CGCCGGAAAG AGTCCAGGTC GCCTGA
 
Protein sequence
MTVVLHDYWR SSASYRVRIA LALKGIAYDR VAVDLVAGAQ RRADHLALNP QGLVPVLEID 
GLRLTQSLAI LEYLEETRPQ PALLPEGAAA RAHARALALA VACEIHPLSN LGVLARVEAL
AGPEARAAWN RENIARGLEA VERLLDHPGF AGRFCHSDRP GMADCVLIPQ IYNASRWGVE
FRHLPRIAAV ASSCSDLAAF QMAAPERVQV A