Gene Pden_3534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3534 
Symbol 
ID4582089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp683546 
End bp684598 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content71% 
IMG OID639770847 
Producttransport system permease protein 
Protein accessionYP_917300 
Protein GI119386245 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4779] ABC-type enterobactin transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCTGC CCCGGACCCG TGCCCTTCGC ATCGGCGGCG CCTCGGTCCT GTGGCGCCCG 
CGCAGCGTGA CCGTCTGCCT GGCGCTGTGC CTGCTGTGCC TTGTGCTGGC ACTGCTGCTG
TTGGGCACCG GCACGGCCCG GCTGTCGCCC GGACAGGTGG TCGAGGGGCT GATCGGCTCA
TCGGACGATG CCACCGCAAC GCGCGTGCTG CGCCGCATCC GGCTGCCGCG GGTGCTGACG
GCGGCGATGG TCGGGGCCTC TCTGGGCATG GCGGGGGCGG TCTTTCAGTC GCTGTCGCGC
AATCCGCTTG GCTCGCCCGA CGTGATCGGC TTCACCACCG GGGCCGCGAC GGGGGCCATC
GTGCAGATCA CCCTGTTCAA TGCCGGGACG TTCCAGGTCG CATCGGCGGC GGTGATCTCG
GGCCTGGCGA CGGCGCTGGT CGTGCTGATG CTGTCGCGGC GCAAGGGGAC CGAGGGCGGC
TATCGCCTGA TCCTGGTCGG CATCGGCGTC GGTGCGGTGC TGACCGGGGT GAACAACGTG
CTGATGGTCA TGGGCAGCCT CGAGCGCGCG ATGTCGGCGC AGATCTGGCT GGCCGGCTCG
TTGAACGCGC GAAGCTGGGG TCATGTCTGG CCGGCACTGG CGGGGCTGGT GCTGTTTGCG
CCGCTGGTTC TGCGGAACGC GCGCCGCCTC GCGTTGCTGG AGATGGGCGA GGCCCTGGCC
GCGCAGCTTG GGCTGAATGT CGGCCGGACC CGGGTGACGC TGGTGATCGT GGCCATCGGG
CTGACCTCGG TCGCGACCGC CAGCGCCGGT CCCATCGCCT TCGTCGCGCT GGCCGGGCCG
CAGATCGCGC GTCGCCTGAC CCGCTCGCCC GAACTGCCGC TGCTGTCCGG GGCGTTGACG
GGGGCGGCGC TGCTGATGGC GGCCGATCTG ATCGGGCAAT GGGCACCCTT CGGCCTGCTG
ATGCCCATCG GCACGATGAC CGGGTTGTGC GGCGGGCTGT ATCTGGTCTG GCTGCTGGGG
CAGGGCGAAA GGACTGCCCC GGCAGGCAGG TGA
 
Protein sequence
MILPRTRALR IGGASVLWRP RSVTVCLALC LLCLVLALLL LGTGTARLSP GQVVEGLIGS 
SDDATATRVL RRIRLPRVLT AAMVGASLGM AGAVFQSLSR NPLGSPDVIG FTTGAATGAI
VQITLFNAGT FQVASAAVIS GLATALVVLM LSRRKGTEGG YRLILVGIGV GAVLTGVNNV
LMVMGSLERA MSAQIWLAGS LNARSWGHVW PALAGLVLFA PLVLRNARRL ALLEMGEALA
AQLGLNVGRT RVTLVIVAIG LTSVATASAG PIAFVALAGP QIARRLTRSP ELPLLSGALT
GAALLMAADL IGQWAPFGLL MPIGTMTGLC GGLYLVWLLG QGERTAPAGR