Gene Pden_3524 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3524 
Symbol 
ID4582079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp673166 
End bp674206 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content72% 
IMG OID639770837 
Producttransport system permease protein 
Protein accessionYP_917290 
Protein GI119386235 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4779] ABC-type enterobactin transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCATCA CCACCACCAC CCTTGCCACC ATCGCCGCCG CGCGGCATCG GCGCGGCCGC 
CGGCGCCGGG CCATCCTTGC CGGCCTGGTC CTGCTGATCG CGGGGATGCT TGCGCTGACG
CTGATGCTGG GCCAGTCCTT CACCCCGCCG GGGCAAGTCA TCCGCGTGCT TGCCGGGCAA
GAGGTGCCCG GCGCCTCGTT CACGGTGCGG CAATTGCGGC TGCCAAGGGC GGTGCTGTCG
GTGCTGGCCG GGTTCTGCTT CGGCATGGGC GGCGTCGCCT TCCAGATCAT GCTGCGCAAC
CCGCTGGCCA GTCCCGACAT CATCGGCATC AGCTCGGGCG CCAGCGCGGC GGCGGTGTTC
GCCATCGTGG TGCTGGGGAT CAGCGGGCCG GCGGTGCCGA TCCTGGCCGT GGCGGCGGGG
CTGGGCGTGG CGCTGGCCAT CTATGGGCTG TCCTTTCGCG GCGGCGTCGC TGGCACCCGG
CTGATCCTGA TCGGCATCGG GGTCGCCGCC ATGCTGCACA GCTTCATCGC CTATACGCTG
TCGCGCGCGC CGGCCTGGGA TCTGCAGCAG GCGCTGCGCT GGCTGACCGG CAGCGTCAAC
GGTGCCCAGC TGGGGCAGGC GCTGCCGCTG CTGGCGGTGC TGGCGCTGGC GGGCGGCGTG
TTGCTGTCCC GGTCCCGCGA TCTCGAGGCG CTGCGCATGG GCGAGGACAC CGCCGCCGCC
CTCGGCGTCC GGGTCGGGCC GACGCGGACG CTGGTGATCG CCTGCGCCGT CGGCATGATC
GCGGTGGCGA CGGCGATCAC CGGGCCGATC TCTTTCGTCG CCTTCCTGTC GGGACCGATC
GCTGCGCGGA TCATGGGCAG CGGCGGCTCG CTTTTGCTGC CCTCGGCACT GGTCGGCGCG
GCGCTGGTGC TGGTCGGCGA CTATTGCGGG CAATTCCTGA TGCCGGGCCG CTATCCGGTC
GGCGTCGTCA CCGGGGCGCT GGGGGCGCCC TATCTGATCT ACCTGATCGT GCGGGTGAAC
CGCGCAGGAG GCTCGCTGTG A
 
Protein sequence
MAITTTTLAT IAAARHRRGR RRRAILAGLV LLIAGMLALT LMLGQSFTPP GQVIRVLAGQ 
EVPGASFTVR QLRLPRAVLS VLAGFCFGMG GVAFQIMLRN PLASPDIIGI SSGASAAAVF
AIVVLGISGP AVPILAVAAG LGVALAIYGL SFRGGVAGTR LILIGIGVAA MLHSFIAYTL
SRAPAWDLQQ ALRWLTGSVN GAQLGQALPL LAVLALAGGV LLSRSRDLEA LRMGEDTAAA
LGVRVGPTRT LVIACAVGMI AVATAITGPI SFVAFLSGPI AARIMGSGGS LLLPSALVGA
ALVLVGDYCG QFLMPGRYPV GVVTGALGAP YLIYLIVRVN RAGGSL