Gene Pden_3515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3515 
Symbol 
ID4582070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp660347 
End bp661585 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content69% 
IMG OID639770828 
Productallantoate amidohydrolase 
Protein accessionYP_917281 
Protein GI119386226 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 
TIGRFAM ID[TIGR01879] amidase, hydantoinase/carbamoylase family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCGCA ATCTCGACGC CTCGGCCGAG GCAATCGGCA GGGATATCGA TGCGCTGGCC 
CGGATCACCG ATCCCGGGCG CCCATGGACG CGCCGCGCCT TCTCGCCCCG TTTCGACGAG
GGGCGCGACC ATCTGCGCCG GCGCTTCGTC GCAGGGGGGT TGCAGGTCTC GACCGATGCG
GGCGGCAACC TGATCGGCCT GCGCAAGGGC ACCCGGCCGG GGGCGGGGAC GATCATGCTG
GGCTCCCATT CGGATACCGT GCCGGATGGC GGGCGTTTCG ACGGGATTGC GGGCGTCGTC
GTGGCGCTGG AGGTCGCGCG CATCCTTGCC CGCCGCGGTG CCGTCCTGCG TCACGATCTT
GCCGTGGTCG ATTTCCTGGC CGAAGAGGTT TCGGTCTTCG GCGTCTCTTG CATCGGTTCG
CGGGCAATGG CCGGGGTGCT GCCGCAGGAT TGGCTGGGAC GCACCAGCGA CGGGCGTGAT
CTTGCGCGGG CAATGGCGGA TGTGGGCGGT GTTCCCGAAA GCCTTCACGG GCCGCTGCGC
GACGATCTGA AGGCCTTTCT GGAGCTGCAT ATCGAACAGG GCCCGGTGCT GGAGGCCGAA
AGGATCGGGC TTGGCATCGT CACGGCCATC GTCGGCATCA CCCGTGTCGA GATCGTGATC
TCTGGCCGCC CGGACCATGC CGGCACCACC CCCATGGGGC TGCGCGCCGA TGCGCTTGCC
GCCTCGGCCC GGATCGTGAC CCAGATCGAG GCCCGCGCGA CGGAGCTGTC GGCCGGTCCC
GCGCATTTCA CCGCCACGGT CGGCGAATTC GAGATATCTC CGAATGCTGC CAATGTCGTG
CCCGCCCGTG TCCGCATGCT TGTCGATATC CGCGCCGAGC GCGCCAGGGA CAAAGAGGCC
TTCGTGACCT GGTTGACGGG TCTTGAAGCC GCGCCCGGCA TCACCGTCGA AACGCGGCTG
ATTTCGGACA ATCCCGGCGT GGGCATGGAT GACGGCTTGC AGCGGAAACT GGCCGAAGCC
GCCGACGGGC TGGGCGCGGC CTGTCGCAGG ATGGTGTCGG GTGCGGGCCA CGATGCGGCC
TTCATGGCGC GGCTTTGCCC CTCGGCGATG GTGTTCGTGC CATGCCGCGA GGGCCGCTCG
CATTGCCCCG AGGAATGGGC CGAGACAGCC GACCTCGCCC TGGCGGCCGA GGTGCTGGCG
AACACGGTCA TGGAACTGGA CAGGAAACGG GAGGGCTGA
 
Protein sequence
MRRNLDASAE AIGRDIDALA RITDPGRPWT RRAFSPRFDE GRDHLRRRFV AGGLQVSTDA 
GGNLIGLRKG TRPGAGTIML GSHSDTVPDG GRFDGIAGVV VALEVARILA RRGAVLRHDL
AVVDFLAEEV SVFGVSCIGS RAMAGVLPQD WLGRTSDGRD LARAMADVGG VPESLHGPLR
DDLKAFLELH IEQGPVLEAE RIGLGIVTAI VGITRVEIVI SGRPDHAGTT PMGLRADALA
ASARIVTQIE ARATELSAGP AHFTATVGEF EISPNAANVV PARVRMLVDI RAERARDKEA
FVTWLTGLEA APGITVETRL ISDNPGVGMD DGLQRKLAEA ADGLGAACRR MVSGAGHDAA
FMARLCPSAM VFVPCREGRS HCPEEWAETA DLALAAEVLA NTVMELDRKR EG