| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3496 |
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| Symbol | |
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| ID | 4582051 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 641701 |
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| End bp | 643002 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 639770809 |
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| Product | fumarate lyase |
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| Protein accession | YP_917262 |
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| Protein GI | 119386207 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0015] Adenylosuccinate lyase |
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| TIGRFAM ID | [TIGR02426] 3-carboxy-cis,cis-muconate cycloisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0886994 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.220131 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGTGG GCACCTTGTT CGGACAGCTT TACGGCGACG ACGAGATGGC AGCGATCCTG
TCGGATCGCT CGGCCATCCT GGCCATGCTG CGGGTCGAGG TCGCATTGGC CCGCGCGCAG
GCCGATCTGG GGGCGATCCC GGCGGCGGCG GCCGAGGTGA TCGCCAAGGC GGCGGAGGCA
CTGGACCCCG ACCCGGCGGA ACTGGCCGCG GCGGTGGCCC GGGCCGGCAT TACCGCGCAG
CCGGTCATCG CGGCGCTGAA ATCCGCGGCG GGCGAGGCCG GGGCATTCGC CCATTACGGC
GCCACCTCGC AGGACATCGT GGACACGGCG CTGGCGCTGC AACTGGTGGC GGCGCTGGAC
CTGTTGGGCG GGCGGCTGGA CCGACTGACG GCGCTGCTGG TGCAGAAGGC CGCCGATCAT
GCCGACCTGC CGATCCCGGC GCGCACCCGC CACCAGATCG CCGCACCGAC CACGCTGGGC
GCCAAGATCG CGGTCTGGCA CGGGATGGCG GCGCGCAACC GGCAACGGCT GGACGAGCTG
CGGCCGCGGC TGCTGCTGGT CTCGCTGCAC GGTGCGGCGG GGACCGAGGC GGCGCTGGCC
GGCCACGGCC CGGCGCTGCG CGCCTCGATG GCGGCGGCGC TGGGGCTGGG GGTGCCGGCG
GGGCCCTGGC ACGCGGCCCG CGACGGCATC GCGGAACTGG CGGGATGGCT GTCGCTGGTC
ACGGGCGCGC TTGGCAAGAT GGGCCTTGAC CTGGTGCAGC TTGGCCAAAG CGAAATCGCC
GAGGTTGCGG CCGGGGCAGG GGGCGGCTCG TCCACCATGC CGCAAAAGCA GAACCCCGTT
GCGGCCGAGG CGCTGGCGAC GCTGGCGCGG CTGAATGCCG GCGATCTGGC GGGGATGCAT
CAGGCGCTGG TCCATGCGCA GGAACGCGAC GGCATCGCGC TGGGGCTGGA ATGGAACCTG
CTGCCGGGAA TGCTGGAACG CTCGGCCGCG GCGCTGCGGA TCGCTTGCGA TCTGGCCGGA
ACGCTGGTTC CCCGGCCCGA CCGTATCGCC GCCACATTCG CCGCCGACCG CGGACGGATG
GCGGCCGAGG CCGCAGGCTT TCTGCTGGCC CAGACCCTGC CCCGCGCCGA GGCGCTGCGG
ATCGTGGCGC AGGCGCTGGC GCAGGTCGCC GGGGGCGAGG CGCCCACGCT GGCCGATGCG
CTGGCGCGGC TTGCGCCCGG CCGGGACTGG GCCGAGGCGC TGCGGCCCGA AAACCTGACC
GGCGCCGCGC CAGACCAGGC GCGCGCCGCA CGACCGATCT GA
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| Protein sequence | MAVGTLFGQL YGDDEMAAIL SDRSAILAML RVEVALARAQ ADLGAIPAAA AEVIAKAAEA
LDPDPAELAA AVARAGITAQ PVIAALKSAA GEAGAFAHYG ATSQDIVDTA LALQLVAALD
LLGGRLDRLT ALLVQKAADH ADLPIPARTR HQIAAPTTLG AKIAVWHGMA ARNRQRLDEL
RPRLLLVSLH GAAGTEAALA GHGPALRASM AAALGLGVPA GPWHAARDGI AELAGWLSLV
TGALGKMGLD LVQLGQSEIA EVAAGAGGGS STMPQKQNPV AAEALATLAR LNAGDLAGMH
QALVHAQERD GIALGLEWNL LPGMLERSAA ALRIACDLAG TLVPRPDRIA ATFAADRGRM
AAEAAGFLLA QTLPRAEALR IVAQALAQVA GGEAPTLADA LARLAPGRDW AEALRPENLT
GAAPDQARAA RPI
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