Gene Pden_3488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3488 
Symbol 
ID4582043 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp634065 
End bp635972 
Gene Length1908 bp 
Protein Length635 aa 
Translation table11 
GC content68% 
IMG OID639770801 
Productphenol 2-monooxygenase 
Protein accessionYP_917254 
Protein GI119386199 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.131796 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTTTC ACCTTGACGG CTTTCGGCCC GGCGACCCGA CCCATCATCC GGCCGCCACC 
GCGCAGGACG ATCCGGCCGG GAACGGTGCG GACGTGGATG TGCTGATCGT CGGCAGCGGT
CCGGCCGGGC TGACGCTGGC GGCGCAATTG GCGATGTTCC CCTCGATCCG CACCCGCATC
GTCGAGCGGA AGCCGGGACC GCTGGAACTG GGCCAGGCCG ACGGGATCGC CTGCCGCACG
ATGGAGATGT TCAACGCCTT CGGCTTTGCC GACCGGGTGA TGAAGGAAGC CTATTGGGTG
AACGAGGTCA CCTTCTGGAA GCCGCAGGAC GGCGATGGCC CGATCATGCG CCACGGCCGT
ATCCGCGACA CCGAGGAGGG GCTTTCGGAA TTTCCCCATG TCATCCTGAA CCAGGCGCGG
GTGCATGACT TCTATCTTGA AGCGATGCGT CACGCTCGGG CCCCGCTGCA ACCGGATTAC
GGCCTGCAAC TGGCCGATCT GACCATTCCC GACGATCCCG CGCAGCCGGT CGAGGCACGG
CTGCGCCCTG TGGGGGCCGA GGACGATTCC CGCGACCAGA TCGTCCGCGC CCGCTATGTC
GTCGGCTGCG ACGGTGCCCG CAGCCAGGTC CGCCGCCGGA TCGGGCGGGA CTTGCGCGGC
GAGGCGGCGA ACCAGGCCTG GGGCGTGATG GACGTTCTGG CCTATACCGA CTTTCCCGAC
ATCCGGCTGA AATCCGCGAT CCATTCCGCG CATGAAGGCA ATATCCTGAT CATCCCGCGC
GAAGGCGGCT ATCTGGTCAG GCTTTACATC GAGCTGGACA AGCTGGCCGA GGATGAGCGC
GTCGCCTCGA AGAACATCAC CCGGGAAACC CTGATCGCCG CCGCGCAGCG GATCCTGCAT
CCCTATGTGC TGGAGGTGAA AGAGGTCGCC TGGTGGTCCG TCTATGAAAT CGGCCAGCGG
CTGACCGACC GTTTCGACGA CCTGCCTGCC GATGCCCCCG CCTCGCGCAT GCCGCGGGTG
TTCATCGCCG GCGACGCCTG CCACACCCAC AGTCCCAAGG CGGGGCAGGG CATGAACGTC
TCGATGCAGG ACAGCTTCAA CCTTGGCTGG AAACTGGCGG CGGTGCTGAG CGGACAGGCC
GATGCCGGGC TGCTGCGCAG CTATTCGGCC GAGCGGCAGG AGGTCGCGCG GGAACTGATC
GACTTCGACC GCGAATTCGC GCGGATGTTC AGCGCCCGCC CCAAGACCGC CGAGGATGAC
GGCGAGGGCG TCGATCCGGC CGAGTTCCAG CGCTATTTCG TCCAGCATGG CCGTTTCACC
GCCGGCACGG CGACGCGTTA TCGCCGTTCG GAACTGACCG GCGCGGATAC GCATCGGCAT
CTGGCCACCG GCTTTCCGGT CGGGATGCGC TTCCATTCGG CGCCGGTGGT GCGGCTGGCC
GATGCGCGGC CCATGCAACT GGGCCATGTC GCCCAGGCGG ACGGGCGCTG GCGGATCTAT
CTGTTCGCCG ACGCGCAGGG GGTGGCGCCC GGCTCGGGGC TGGCGCGGCT TTGCGAGCGG
CTGGACCGGG AGGGCTCGGT CCTGCGGCGC CATACCCCCG CGGGCGCGAA TCCCGATGCG
GTGTTCGACA TCCGCGCGGT GTTGCAGCAG CCCCACCAGT CGCTGTCGAT GGACGACCTG
CCGGGGCTGC TGTGGCCGCG CAAGGGTCGC CACGGGCTGC GCGACTATGA AAAGGCGTTC
TGCGCCGATC CGGCCGCGGG CGACATCTTC GATCTGCGCG GCATCGACCG CGAGCGGGGC
TGCATGGTGG TGGTGCGCCC CGACCAATAT GTCGCCCAGG TCCTGCCGCT GGAGGATGAC
GCGACGCTGG GCGAATATTT CGCGGGCGTG CTGCGGCTGG CGGGCTAG
 
Protein sequence
MQFHLDGFRP GDPTHHPAAT AQDDPAGNGA DVDVLIVGSG PAGLTLAAQL AMFPSIRTRI 
VERKPGPLEL GQADGIACRT MEMFNAFGFA DRVMKEAYWV NEVTFWKPQD GDGPIMRHGR
IRDTEEGLSE FPHVILNQAR VHDFYLEAMR HARAPLQPDY GLQLADLTIP DDPAQPVEAR
LRPVGAEDDS RDQIVRARYV VGCDGARSQV RRRIGRDLRG EAANQAWGVM DVLAYTDFPD
IRLKSAIHSA HEGNILIIPR EGGYLVRLYI ELDKLAEDER VASKNITRET LIAAAQRILH
PYVLEVKEVA WWSVYEIGQR LTDRFDDLPA DAPASRMPRV FIAGDACHTH SPKAGQGMNV
SMQDSFNLGW KLAAVLSGQA DAGLLRSYSA ERQEVARELI DFDREFARMF SARPKTAEDD
GEGVDPAEFQ RYFVQHGRFT AGTATRYRRS ELTGADTHRH LATGFPVGMR FHSAPVVRLA
DARPMQLGHV AQADGRWRIY LFADAQGVAP GSGLARLCER LDREGSVLRR HTPAGANPDA
VFDIRAVLQQ PHQSLSMDDL PGLLWPRKGR HGLRDYEKAF CADPAAGDIF DLRGIDRERG
CMVVVRPDQY VAQVLPLEDD ATLGEYFAGV LRLAG