Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_3479 |
Symbol | |
ID | 4582034 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | - |
Start bp | 625891 |
End bp | 626646 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639770792 |
Product | regulatory proteins, IclR |
Protein accession | YP_917245 |
Protein GI | 119386190 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0476526 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGAAAAGG CCGAGACCGT CCGGGCCGCC GACACCTGCC TGCGCATCCT CGAGCGCATC GCATTCGCTG ATTCGCCCGT TGGCGTGACG CAGATTTCCG GCGATGTCGG CATCGCCAAG GGGGCGGCGT TCAAGCATCT GCGCACGCTG ATCGAACATG GGATGATCGT GCAGGATCCG GTCACATCGC ATTACGCGCT GGGGCCGAAG CTGTGGCTGA TGGCCCAGCA GGCACCCGCC GGCGCAAACC TGGCCGAACT GGCCCTGCCC CTGATGCGCG CGACCCGCGA CGAACTGGGC ATGGCGGTGG TGCTCAGCAT CCCCGCGCCG CACTCGGCCT TCATCCTGGC CACGGTCAGC AGCAACCAGC CGATCGAGAT CGGCGTCCGT CCCGGCAGCG AGCTGAGCCT GCATTCCTCC GCCCAGGGAA AGGTATTCCT GGCCTTCGGC TCGCCCGAAT TGCTGGCCAC GCTGCCCGAC ACGCTGCCGC AGGTCACGCC GAAAAGCGTC ACCTCCAGGA CGGCCCTGGC GGCGCAGCTC GACGGCATCC GCGCGTCGGG CTATGCGACG GCGCCAGAGG AATCGCTGCT GGGCATCAAT GCCATCGCCG CGCCGATCCT CAGCCCGCGG GGCCAGCTTC TCGGCAGCAT CGGCCTGATC GCGTCGATCC AGCACCTGGG CGCGGACCCG ACGCCCTCGC AACTCAAGGC GCTGTTCGCC CTGACCCGAG AGATCGGGCT GCTCGCCAGC CAATGA
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Protein sequence | MEKAETVRAA DTCLRILERI AFADSPVGVT QISGDVGIAK GAAFKHLRTL IEHGMIVQDP VTSHYALGPK LWLMAQQAPA GANLAELALP LMRATRDELG MAVVLSIPAP HSAFILATVS SNQPIEIGVR PGSELSLHSS AQGKVFLAFG SPELLATLPD TLPQVTPKSV TSRTALAAQL DGIRASGYAT APEESLLGIN AIAAPILSPR GQLLGSIGLI ASIQHLGADP TPSQLKALFA LTREIGLLAS Q
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