Gene Pden_3479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3479 
Symbol 
ID4582034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp625891 
End bp626646 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content68% 
IMG OID639770792 
Productregulatory proteins, IclR 
Protein accessionYP_917245 
Protein GI119386190 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0476526 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGAAAAGG CCGAGACCGT CCGGGCCGCC GACACCTGCC TGCGCATCCT CGAGCGCATC 
GCATTCGCTG ATTCGCCCGT TGGCGTGACG CAGATTTCCG GCGATGTCGG CATCGCCAAG
GGGGCGGCGT TCAAGCATCT GCGCACGCTG ATCGAACATG GGATGATCGT GCAGGATCCG
GTCACATCGC ATTACGCGCT GGGGCCGAAG CTGTGGCTGA TGGCCCAGCA GGCACCCGCC
GGCGCAAACC TGGCCGAACT GGCCCTGCCC CTGATGCGCG CGACCCGCGA CGAACTGGGC
ATGGCGGTGG TGCTCAGCAT CCCCGCGCCG CACTCGGCCT TCATCCTGGC CACGGTCAGC
AGCAACCAGC CGATCGAGAT CGGCGTCCGT CCCGGCAGCG AGCTGAGCCT GCATTCCTCC
GCCCAGGGAA AGGTATTCCT GGCCTTCGGC TCGCCCGAAT TGCTGGCCAC GCTGCCCGAC
ACGCTGCCGC AGGTCACGCC GAAAAGCGTC ACCTCCAGGA CGGCCCTGGC GGCGCAGCTC
GACGGCATCC GCGCGTCGGG CTATGCGACG GCGCCAGAGG AATCGCTGCT GGGCATCAAT
GCCATCGCCG CGCCGATCCT CAGCCCGCGG GGCCAGCTTC TCGGCAGCAT CGGCCTGATC
GCGTCGATCC AGCACCTGGG CGCGGACCCG ACGCCCTCGC AACTCAAGGC GCTGTTCGCC
CTGACCCGAG AGATCGGGCT GCTCGCCAGC CAATGA
 
Protein sequence
MEKAETVRAA DTCLRILERI AFADSPVGVT QISGDVGIAK GAAFKHLRTL IEHGMIVQDP 
VTSHYALGPK LWLMAQQAPA GANLAELALP LMRATRDELG MAVVLSIPAP HSAFILATVS
SNQPIEIGVR PGSELSLHSS AQGKVFLAFG SPELLATLPD TLPQVTPKSV TSRTALAAQL
DGIRASGYAT APEESLLGIN AIAAPILSPR GQLLGSIGLI ASIQHLGADP TPSQLKALFA
LTREIGLLAS Q