| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3454 |
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| Symbol | |
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| ID | 4582010 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | - |
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| Start bp | 597192 |
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| End bp | 598448 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639770768 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_917221 |
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| Protein GI | 119386166 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.321587 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCCGG CCGGGCGCCG CTGCATCGCT GCGCCCGGCC GCTGCACCCG CCATCCGGCC
AAAGCCCGCC GGCCATGCCG CCCGGGTTTC CTGCACATTG CCCCGGATGA AGGCAGCATG
AGATTTTCGC CCGATCAGAT GCGTCGATAT GTCACATTGC TTGCAGTGAC GAAGCTTTCA
GGGCAATACT CGGGCCACGT CGGCGCCAGG CCGCAAGCCA AGGGCGCAAA GACGGGCGGC
AAAGGCATCC GCCGCAATGC CAACCACCGA GTCGGAAGAA ACATGCCCCT TCGCTATACG
CTGCGGCAGC TCGAATACTT CGTCGCCGTG GGCGAGACCG GCAGCATTGC CGCCGCCTCG
CAGCAGGTGA ACGTCTCGTC GCCCTCGATC TCGGCCGGGA TCTCGCAGCT CGAGGAAGAA
CTGGGGGTCA AGCTTTTCAT CCGCTATCAC GCGCAGGGCC TGACGCCGAC GCTGGCGGGG
CGCAAATTGC TCGACCATGC GCAGACCGTG CTGCGCCAGG CCGCGACGTT GCGCGATCTG
GCGGGGGATC TGTCCGGCTC GGTCCGCGGG CCGCTGGCCA TCGGTTGCCT CAGCACATTC
GCCCAGATCG TGTTGCCGGG CCTGCGGCGC AGCTTCATCG AGGAATACGA CGAGGTCCGC
ATCTCGCAGG TCGAGGCCGA CCAGGCCGAG CTGTTCAGCC TGCTGCGGCA GGCCAAGATC
GACCTGGCGC TGACCTACGA CCTGGACCTG CCGGGCGACC TGCGCTTCTT CCCGATCATC
GAACTGCCGC CGCTGGTCGC GATGAGCGAA AACCACCCGC TGGCGCATCT GTCCGAAGTC
TCGGTCCAGC AGCTTGCGCC TCATCCCATG GTGCTGCTCG ATCTGCCGCT GAGTTCCGAA
TATTTCCTGT CCTTCTTCAC CAAGGCCGGA TTGCGCGCCA ATATCTCCGA GCGCACGCGC
GACATGGCGG TGATGCGCAG CCTTGTCGCC AATGGCTTCG GCTATTCCAT CGTGAACGTC
CGGCCCCTGC ACGACGTGGC GCCGGACGGA AAGCCGATGC GGTTCCTGCC CCTTACCGGC
ACACCGCGCC CGATGAAGCT GGGCCTGCTG ATAAGCCGGG GGACCGAGCG TCCCCGGCTG
CACAAGGTCT TTATCGACCA CGCCCGCGAC TGGATCGAAA GGCAGAGCCG GAATCTGCTG
GGCCTGCTTC CGCCCGCCGA CACCGAGGAG CCCCGGCGCG CAAGCCGCAG CGGCTGA
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| Protein sequence | MNPAGRRCIA APGRCTRHPA KARRPCRPGF LHIAPDEGSM RFSPDQMRRY VTLLAVTKLS
GQYSGHVGAR PQAKGAKTGG KGIRRNANHR VGRNMPLRYT LRQLEYFVAV GETGSIAAAS
QQVNVSSPSI SAGISQLEEE LGVKLFIRYH AQGLTPTLAG RKLLDHAQTV LRQAATLRDL
AGDLSGSVRG PLAIGCLSTF AQIVLPGLRR SFIEEYDEVR ISQVEADQAE LFSLLRQAKI
DLALTYDLDL PGDLRFFPII ELPPLVAMSE NHPLAHLSEV SVQQLAPHPM VLLDLPLSSE
YFLSFFTKAG LRANISERTR DMAVMRSLVA NGFGYSIVNV RPLHDVAPDG KPMRFLPLTG
TPRPMKLGLL ISRGTERPRL HKVFIDHARD WIERQSRNLL GLLPPADTEE PRRASRSG
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