| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3447 |
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| Symbol | |
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| ID | 4582003 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 588344 |
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| End bp | 589516 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639770761 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_917214 |
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| Protein GI | 119386159 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTTTC GCTTTCTCCA TCGGCTTGCC CGGCTGGGCA TTGCCCTGGC CGCTTTTTCC
CTTGCGGGAC AGGCCGCGGC GCAGCAGCCC GCCGCGCCCG GTCCCAGGCA GGTCGGGGTG
ATTTCCGTCA CGGCCGAATC CGTGCCGCTG GTCAGCACGC TGCCCGGTCG CGCCGTGGCA
CGGGATGCGG TGGACATCCG CCCGCGCGTG GACGGTTTCG TGACCGAGGT GCTCTACAAT
CCCGGCCAGC CGATCAAGGT GGGCGATCCC ATGTTCCGCA TCGATCCGAC CACCTATGAG
GCCGCGGTCC AGGAGGCGCG GGCCAACCTT GCCTCGGCCA AGGCGGCCGT GCCGCAGGCC
GAGGCGGCCT ATGAGCGGTC GCGCCGGCTG CAGGGCTCGG GCTCGACCCA GGCGGCCCTG
GAACAGGCGC AGGCCACGAT GGAGCAGGCG CAGGCCGCCG CCGCCGCCGC CGAGGCGGCG
CTGAAGCTGG CCGAGACGCA GCTGTCCTGG ACCACGATCG CCAGCCCGCT GGACGGGCTG
CCCTCGGTCG CCGCGGTCTC GCCGGGCGAC CTGGTCACCG CGGGGCAAAG CGATGCGCTG
GCGACGGTCA CCCAGCTCGA TCCCATCGAC GTGGACATGT ACGAACCCTC GGCCCGGCTG
CAACGCATCC GCGAGCGCAT CGAGTCGGGC CAGATCAGGA TGAGCCAGGG GCTGAAGGCG
CAGCTGACGC TGGAGAACGG CGTGACCTAT GCCGCCACGG GCGAGATGGT GGCGCCGGGC
TATACCGTCT CGACCTCGAC CGGGGCCATC GACTTCCGTT TCCGCTTCGA CAATCCCGAG
CGCCGCATCC TGCCCGGCAT GTTCGTGCGC GGCCGGATCG AGATCGGCCG GATCCAGGCG
GTGCTGGTGC CGCAGATGGC TGCGACGCGC GGGCGCGACG GCACGCTTTC GGCCTGGGTG
GCCGAGGATG GCAAGGCGGT AAAGCGCGTG CTGACCGAGG AGGGCGTGCA TGAGAACAGC
TGGATCGTCA CCGACGGGCT GAAGGACGGC GACGCGCTGA TCGTGAACGG TGGCACCAAT
CTGGCCGAAG GCGCCGAGGT CGCGCCGGTT GCGGTCGAGA TCGACGAGAA CGGCGTGGTC
CGCGACCTGC CGGCGACGCA GCAGGCGGAG TGA
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| Protein sequence | MTFRFLHRLA RLGIALAAFS LAGQAAAQQP AAPGPRQVGV ISVTAESVPL VSTLPGRAVA
RDAVDIRPRV DGFVTEVLYN PGQPIKVGDP MFRIDPTTYE AAVQEARANL ASAKAAVPQA
EAAYERSRRL QGSGSTQAAL EQAQATMEQA QAAAAAAEAA LKLAETQLSW TTIASPLDGL
PSVAAVSPGD LVTAGQSDAL ATVTQLDPID VDMYEPSARL QRIRERIESG QIRMSQGLKA
QLTLENGVTY AATGEMVAPG YTVSTSTGAI DFRFRFDNPE RRILPGMFVR GRIEIGRIQA
VLVPQMAATR GRDGTLSAWV AEDGKAVKRV LTEEGVHENS WIVTDGLKDG DALIVNGGTN
LAEGAEVAPV AVEIDENGVV RDLPATQQAE
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