Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_3445 |
Symbol | |
ID | 4582001 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | - |
Start bp | 586309 |
End bp | 587514 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639770759 |
Product | RND family efflux transporter MFP subunit |
Protein accession | YP_917212 |
Protein GI | 119386157 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.655677 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCAAGA CCATGCCAGT CGCGCTGATC CTGGGCGCCC TGCTGATCGC GGTCGCAGTG CTGCGCTGGC CCGGCGCCAC GCCGGGCGGT GCCGCCGCCC CGGGCTACCT GACCGCGCCT GCAGAGCGCG GTTCTCTTGA GGTATCGGTT CTTGCTGAGG GTCGTTTGAA GCCTTCGAAC CTTGTTGCGG TGGGTGCGCA GGTTTCGGGT CGGATCACCG AGCTGGCGGT GGTTCTGGGC CAGCGGGTGG AGCAGGGCGA CCTGATCGCG CGGATCGACT CGGTCCAGCA GGCCAACGAA TTGCGCACCG CACAGGCGGC GCTGGCCAAT CTCAAGGCGC AGATGGCCGA GCGCCGCGCC GTGCTGGCCC TGGCCGAAAA GACCCTGGAA CGCCAGCAGA ACCTGATCCG CTCGAACGCC GCCTCGCGCA GCACCATGGA CAGCGCCCAG CAGGATGTCG ACGTCGCCCG CGCCCAGATC GCCGCGCTGC AGGCCCAGAT CGCCCAGGCC GAGGTCGCCA TCGAGATCGC CCGCACCGAC CTCGACTATA CCCGCATCAC CGCCCCCATG GCCGGCACCG TGCTGGCCAT CGTCAGCCAG GCCGGGCAGA CGGTGAACGC GGTGCAGTCC TCGCCCACCA TCGTCGTGCT GGGCCAGCTC GACCGCATGG ACGTGCATGC CGAGATCTCC GAGGCCGATA TCGGCAAGGT CCGGCCCGGC CAGAAGGTGC GCTTCAGCCT GCTCGACGAC AGCGGCCGCA GCTACGAGGG CGTGCTGGAC AGCATCGCGC CGGCGCCGCA GAGCATCGTC AACGACAGCG CCATCCAGGG CGGCACCGGC ACCGACAGCA GCAGCGGCGC GATCTACTAC ACCGGCATCG TCCCGGTCGA GAACCCCGAC GGCCGGCTGC GCAGCTACAT GACCGCCCAG GTCAGCATCG TGCTGGGCGC GGCGCAGGAC GTGCTGACCA TCCCGTCCAG CGCGCTCGGC CGGCGCAATC CCGACGGCAG CCACCAGGTC CGGGTGCTGG GCGGCGCCGG CATCGAGACC CGCGACGTGG TGATCGGGCT CAACGACAAG GTGGCGGCCG AGGTGGTCTC GGGCCTGGCC GAGGGCGAGC GCGTGGTGAC CGGCGAGCAG GGCGCCGCCC CGGCCGCCGC CGCCCCCCGC GGCAGCCGCC GCATGATGGG GCCGCTGGGT GGCTGA
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Protein sequence | MRKTMPVALI LGALLIAVAV LRWPGATPGG AAAPGYLTAP AERGSLEVSV LAEGRLKPSN LVAVGAQVSG RITELAVVLG QRVEQGDLIA RIDSVQQANE LRTAQAALAN LKAQMAERRA VLALAEKTLE RQQNLIRSNA ASRSTMDSAQ QDVDVARAQI AALQAQIAQA EVAIEIARTD LDYTRITAPM AGTVLAIVSQ AGQTVNAVQS SPTIVVLGQL DRMDVHAEIS EADIGKVRPG QKVRFSLLDD SGRSYEGVLD SIAPAPQSIV NDSAIQGGTG TDSSSGAIYY TGIVPVENPD GRLRSYMTAQ VSIVLGAAQD VLTIPSSALG RRNPDGSHQV RVLGGAGIET RDVVIGLNDK VAAEVVSGLA EGERVVTGEQ GAAPAAAAPR GSRRMMGPLG G
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