Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_3438 |
Symbol | |
ID | 4581994 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | - |
Start bp | 580165 |
End bp | 581424 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639770752 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_917205 |
Protein GI | 119386150 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCTCGC TCCAGACCCG CATCGCCGCC CTGCTGATCG CGGCCATCGT CAGCGTCGTG GTGCTGGCGA CCTATACCGC GACCAGCGTG ATGCGCCCGC CCTTGCCGCA GGCCACGATG GAGCCGGTGG CGCGGCAGAT CCATGCGACC CTGGCATTGC TGGGCCACGG CCAACCCCAG GACCGACCGG GCGCCTTGCA GCCCGCACCC GCGGGGGGCG AGCCGGACGA GCGGATGTCG CGCTTTCTCG GCGGCGCCCT GCGCCATACC GGCCAGCCGC TCGAGGCGCG GGTCAGCAAG CTGCCGGGCC AGGAATCCTT CACCGCCTCG ATCCGGGTCG GCGACGGCCG CTGGTTCATC ACCGAGATAC CGGACCTGTC GCCACCCCCC GGCCGCTGGA AGGTGCTGGT GATCTGGCTG GCACTGATCG TGCTGGGCAG CGCCGCCATT TCGATCCATG CCGCGCGCCG GCTGACCCGG CCGCTGCAAC TGCTCGAGGA TGCGGTGGAT CGCGTCGGCC CCGACGGCGT CCTGGAGCAG ATCCCCGAAA CCGGCACGGG CGAGGTGCGG ACGGCGGCAC GGGCGCTGAA CCGGCTCTCG GCGCAGTTGA GGCAGGCGAT GGAAAGCCGG ATGCGGCTGG TGGCGGCGGC GGGGCACGAC CTGCGCACGC CGATGACCCG CATGCGGCTG CGCGCCGAGT TCATCGAGGA CGATGCCGAG CGGGCGAAAT GGCTCTCGGA TCTCGAAGAG CTGGACATGA TCGCCGACAG CGCCATCCGG CTGGTGCGCG AAGAGGTCGG GCTGGACGGG GGCGAACCGA TCCGGCTGGA CCGTCTGCTG CGCCAGATCG CCCTGGAACT GCACGCGCTG GACCAGAAGG TCGAGCTGGG CGCGCTGCCG CCGCTGACCG TCCATGCCGG CCCCATCGCG CTGAAGCGCG CGCTGCGCAA CCTGATCGCC AATGCCGCGA CCCATGGCGG CGGGGCGCGC GTGGCGCTGG CGCGCGAGGG CGACGATGCG GTGATCAGGA TCGAGGACGA CGGCCCCGGC GTGCCGCCCG AACTGCTGGC GCAGATCTTC GAGCCCTTCT TCCGCGTCGA TCAGGCCCGG CGCAAATCCT TTCCCGGCGC CGGGCTCGGC CTTGCCATCG CGCGCGAGAT CGTCGAGCGC CATCTGGGCC GGATCACCAT CCGCAACCGC GAGCCGCGCG GGCTTTTGCA GATCTGCACC CTGCCCTGCG CACAATCCGG CCGGTCCTGA
|
Protein sequence | MSSLQTRIAA LLIAAIVSVV VLATYTATSV MRPPLPQATM EPVARQIHAT LALLGHGQPQ DRPGALQPAP AGGEPDERMS RFLGGALRHT GQPLEARVSK LPGQESFTAS IRVGDGRWFI TEIPDLSPPP GRWKVLVIWL ALIVLGSAAI SIHAARRLTR PLQLLEDAVD RVGPDGVLEQ IPETGTGEVR TAARALNRLS AQLRQAMESR MRLVAAAGHD LRTPMTRMRL RAEFIEDDAE RAKWLSDLEE LDMIADSAIR LVREEVGLDG GEPIRLDRLL RQIALELHAL DQKVELGALP PLTVHAGPIA LKRALRNLIA NAATHGGGAR VALAREGDDA VIRIEDDGPG VPPELLAQIF EPFFRVDQAR RKSFPGAGLG LAIAREIVER HLGRITIRNR EPRGLLQICT LPCAQSGRS
|
| |