Gene Pden_3438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3438 
Symbol 
ID4581994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp580165 
End bp581424 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content72% 
IMG OID639770752 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_917205 
Protein GI119386150 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTCGC TCCAGACCCG CATCGCCGCC CTGCTGATCG CGGCCATCGT CAGCGTCGTG 
GTGCTGGCGA CCTATACCGC GACCAGCGTG ATGCGCCCGC CCTTGCCGCA GGCCACGATG
GAGCCGGTGG CGCGGCAGAT CCATGCGACC CTGGCATTGC TGGGCCACGG CCAACCCCAG
GACCGACCGG GCGCCTTGCA GCCCGCACCC GCGGGGGGCG AGCCGGACGA GCGGATGTCG
CGCTTTCTCG GCGGCGCCCT GCGCCATACC GGCCAGCCGC TCGAGGCGCG GGTCAGCAAG
CTGCCGGGCC AGGAATCCTT CACCGCCTCG ATCCGGGTCG GCGACGGCCG CTGGTTCATC
ACCGAGATAC CGGACCTGTC GCCACCCCCC GGCCGCTGGA AGGTGCTGGT GATCTGGCTG
GCACTGATCG TGCTGGGCAG CGCCGCCATT TCGATCCATG CCGCGCGCCG GCTGACCCGG
CCGCTGCAAC TGCTCGAGGA TGCGGTGGAT CGCGTCGGCC CCGACGGCGT CCTGGAGCAG
ATCCCCGAAA CCGGCACGGG CGAGGTGCGG ACGGCGGCAC GGGCGCTGAA CCGGCTCTCG
GCGCAGTTGA GGCAGGCGAT GGAAAGCCGG ATGCGGCTGG TGGCGGCGGC GGGGCACGAC
CTGCGCACGC CGATGACCCG CATGCGGCTG CGCGCCGAGT TCATCGAGGA CGATGCCGAG
CGGGCGAAAT GGCTCTCGGA TCTCGAAGAG CTGGACATGA TCGCCGACAG CGCCATCCGG
CTGGTGCGCG AAGAGGTCGG GCTGGACGGG GGCGAACCGA TCCGGCTGGA CCGTCTGCTG
CGCCAGATCG CCCTGGAACT GCACGCGCTG GACCAGAAGG TCGAGCTGGG CGCGCTGCCG
CCGCTGACCG TCCATGCCGG CCCCATCGCG CTGAAGCGCG CGCTGCGCAA CCTGATCGCC
AATGCCGCGA CCCATGGCGG CGGGGCGCGC GTGGCGCTGG CGCGCGAGGG CGACGATGCG
GTGATCAGGA TCGAGGACGA CGGCCCCGGC GTGCCGCCCG AACTGCTGGC GCAGATCTTC
GAGCCCTTCT TCCGCGTCGA TCAGGCCCGG CGCAAATCCT TTCCCGGCGC CGGGCTCGGC
CTTGCCATCG CGCGCGAGAT CGTCGAGCGC CATCTGGGCC GGATCACCAT CCGCAACCGC
GAGCCGCGCG GGCTTTTGCA GATCTGCACC CTGCCCTGCG CACAATCCGG CCGGTCCTGA
 
Protein sequence
MSSLQTRIAA LLIAAIVSVV VLATYTATSV MRPPLPQATM EPVARQIHAT LALLGHGQPQ 
DRPGALQPAP AGGEPDERMS RFLGGALRHT GQPLEARVSK LPGQESFTAS IRVGDGRWFI
TEIPDLSPPP GRWKVLVIWL ALIVLGSAAI SIHAARRLTR PLQLLEDAVD RVGPDGVLEQ
IPETGTGEVR TAARALNRLS AQLRQAMESR MRLVAAAGHD LRTPMTRMRL RAEFIEDDAE
RAKWLSDLEE LDMIADSAIR LVREEVGLDG GEPIRLDRLL RQIALELHAL DQKVELGALP
PLTVHAGPIA LKRALRNLIA NAATHGGGAR VALAREGDDA VIRIEDDGPG VPPELLAQIF
EPFFRVDQAR RKSFPGAGLG LAIAREIVER HLGRITIRNR EPRGLLQICT LPCAQSGRS