Gene Pden_3436 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3436 
Symbol 
ID4581992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp578094 
End bp579287 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content71% 
IMG OID639770750 
Productpeptidase M24 
Protein accessionYP_917203 
Protein GI119386148 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0006] Xaa-Pro aminopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.767066 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATGA TCGACGACCT TATCGCCGCG CCGCCGGCCG ACCCCCTGCA AGGCGGCGAT 
GCCGTTTTCC CCCAGGCGGA ATTCACCGGC CGCCTCGCGC GCCTGCGGCT TGCCATCCAG
CCGCTGGGCG CGGACGCCGT CATGCTGACC GGGCCCGAGA ACATCTTCTG GGCCTGCGGT
CGCCAGACGG CGGGGTATTT CGCCTTTCAG GCGCTGATCG TCCCGCTGGA GGGGGAGCCT
GTCCTGCTGG TGCGTCAGTT GGAGACGACC GGCGCCCGGG CCTCGACCTG GCTGCGCGAC
ATCCGCGCCT GGCAGGACGG CGAGGATCCG GCCCGGGCGT TGGCCGAACT GGTCGCGGAT
CTGGGGATCC GCCGCCTGGC GGTCGAGCGC GACGGCTGGT TCGTCAGCCA GTCGCTGGGC
GCCCGCATAT CGGCCGCGCT GGAAGGCGTG GATCTGTGCG ACGGCGCGTC GGTGGTCGAG
GGGCTGCGTG CCGTCAAGTC CCCGGCCGAG CTTGCGGCGA TCCGGCTTGC GGCGGGCTAT
GCCCAGGCCG GTCTGGGCGC GGCCATCGAG CGCTGCGCCG CCGGCGTCAG CGAGAACGAC
CTGGCCGCCG CCATGTTTTC GGCGGCGATC TCGGCCGGGT CCGAGGCGAT GGCGATGGAG
CCCTTGATCT CGTCGGGGCC ACGCTCGGGC GTGCCGCACG CGACCTGGCG CCGGCGTGTG
CTTCTGGAGG GCGATCCGGT TTTCCTTGAG CTTGCCGCCA GCCACGACCG CTATCACGCC
GCCCTGATGC GCAGTGTGTG GATCGGGTCG CCGCCGGCCG AGGCGCGGCG CATGATGGAT
GTGGCCCTGC GGGCGCTGGA TGCGGCGCTG GCGTCGATGC GGCCCGGCGT GCCTTGCAGC
CTGCCCCATG ATGCGGCGCA GGCCGTCATC GACGATGCGG GATATGCGGC GGCCTTTCGC
AAGCGCATCG GCTATTCGAT GGGGGCGGCA TTCGCGCCGG ACTGGGGCGA AGGGGCGATC
CTGTCGCTGT TTTCGGGCGT GTCCCGCGAA CTCGAGCCGG GCATGGTCTT TCACCTTCCG
GCCACGCTGC GGGCCTATGG CGCCTTCACG GTCGGCGCTT CCGAGACCGT GATCGTGACC
CGATCCGGCA TCGAGATCCT TTCCGACCTG CCGCGCACCC TTTGCATCCG TTGA
 
Protein sequence
MKMIDDLIAA PPADPLQGGD AVFPQAEFTG RLARLRLAIQ PLGADAVMLT GPENIFWACG 
RQTAGYFAFQ ALIVPLEGEP VLLVRQLETT GARASTWLRD IRAWQDGEDP ARALAELVAD
LGIRRLAVER DGWFVSQSLG ARISAALEGV DLCDGASVVE GLRAVKSPAE LAAIRLAAGY
AQAGLGAAIE RCAAGVSEND LAAAMFSAAI SAGSEAMAME PLISSGPRSG VPHATWRRRV
LLEGDPVFLE LAASHDRYHA ALMRSVWIGS PPAEARRMMD VALRALDAAL ASMRPGVPCS
LPHDAAQAVI DDAGYAAAFR KRIGYSMGAA FAPDWGEGAI LSLFSGVSRE LEPGMVFHLP
ATLRAYGAFT VGASETVIVT RSGIEILSDL PRTLCIR