Gene Pden_3432 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3432 
Symbol 
ID4581988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp574592 
End bp575242 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content66% 
IMG OID639770746 
ProductGntR family transcriptional regulator 
Protein accessionYP_917199 
Protein GI119386144 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.132656 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATAT CGTCGAACCT GTCGCAGGAA GCGCATCGCC GGATCATCGG CATGATCTTC 
GAGGGTGCGC TCAAGTCGGG TGATGCCCTG CAAGAGGCAC CGCTGGGCGA GCGGCTGGGC
ATGTCGCGCA CCCCCGTGCG CGAGGCGATC AAGCGTATCG AAAGCGAAGG GCTGGCCGAG
ACCTCGGGCC GTTTCACGCG TGTCCGGCAC ATGCGGCGCA GCGAGTTCGA GGAGATCTTT
TTCCTGCGTT TGCAGCTTGA GCCCTTTGCC GCGCGGGCGG CGGTGCGCCT GCCGCCGGCA
CAGGTGGATG CGATGGAGGA GCGTATCCGG CGCCTGATGG CGGCAGGCCC GGAGCTGGAT
GGTAGTCATT TCCAGACCGA CAACGACTTC CACGACATGA TGCTGCAACC GCTGGGCAAC
CGGACGATCA GCGCCGTCGT CGCCTCGCTG AGGCGGCGCA CCTGCGTCTT CGACCATACC
CAGGTGCCCG ACCGTTTCCT GCAGGGCTGC GACGAGCATC TGGATATCCT GAACGCGGTG
CGCTCGGGCA ATGCCGATGC CGTGGCCACC GGGATGGTGC GGCATCTGGA AAACGCACGG
GATGCCGTCC TGGACCGCCT GGACCGGATT TCGGCAGAGA CCGCGCCATG A
 
Protein sequence
MSISSNLSQE AHRRIIGMIF EGALKSGDAL QEAPLGERLG MSRTPVREAI KRIESEGLAE 
TSGRFTRVRH MRRSEFEEIF FLRLQLEPFA ARAAVRLPPA QVDAMEERIR RLMAAGPELD
GSHFQTDNDF HDMMLQPLGN RTISAVVASL RRRTCVFDHT QVPDRFLQGC DEHLDILNAV
RSGNADAVAT GMVRHLENAR DAVLDRLDRI SAETAP