Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_3432 |
Symbol | |
ID | 4581988 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | + |
Start bp | 574592 |
End bp | 575242 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639770746 |
Product | GntR family transcriptional regulator |
Protein accession | YP_917199 |
Protein GI | 119386144 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.132656 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATAT CGTCGAACCT GTCGCAGGAA GCGCATCGCC GGATCATCGG CATGATCTTC GAGGGTGCGC TCAAGTCGGG TGATGCCCTG CAAGAGGCAC CGCTGGGCGA GCGGCTGGGC ATGTCGCGCA CCCCCGTGCG CGAGGCGATC AAGCGTATCG AAAGCGAAGG GCTGGCCGAG ACCTCGGGCC GTTTCACGCG TGTCCGGCAC ATGCGGCGCA GCGAGTTCGA GGAGATCTTT TTCCTGCGTT TGCAGCTTGA GCCCTTTGCC GCGCGGGCGG CGGTGCGCCT GCCGCCGGCA CAGGTGGATG CGATGGAGGA GCGTATCCGG CGCCTGATGG CGGCAGGCCC GGAGCTGGAT GGTAGTCATT TCCAGACCGA CAACGACTTC CACGACATGA TGCTGCAACC GCTGGGCAAC CGGACGATCA GCGCCGTCGT CGCCTCGCTG AGGCGGCGCA CCTGCGTCTT CGACCATACC CAGGTGCCCG ACCGTTTCCT GCAGGGCTGC GACGAGCATC TGGATATCCT GAACGCGGTG CGCTCGGGCA ATGCCGATGC CGTGGCCACC GGGATGGTGC GGCATCTGGA AAACGCACGG GATGCCGTCC TGGACCGCCT GGACCGGATT TCGGCAGAGA CCGCGCCATG A
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Protein sequence | MSISSNLSQE AHRRIIGMIF EGALKSGDAL QEAPLGERLG MSRTPVREAI KRIESEGLAE TSGRFTRVRH MRRSEFEEIF FLRLQLEPFA ARAAVRLPPA QVDAMEERIR RLMAAGPELD GSHFQTDNDF HDMMLQPLGN RTISAVVASL RRRTCVFDHT QVPDRFLQGC DEHLDILNAV RSGNADAVAT GMVRHLENAR DAVLDRLDRI SAETAP
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