Gene Pden_3410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3410 
Symbol 
ID4581966 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp554677 
End bp555207 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content65% 
IMG OID639770724 
Producthypothetical protein 
Protein accessionYP_917177 
Protein GI119386122 
COG category[R] General function prediction only 
COG ID[COG1402] Uncharacterized protein, putative amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGGGTCGG GCTGGGCGAT CTTCGGCCTA GGGCTCAGCC GGTGGAAGGC AGGCCAAGTT 
TCTCCTGCAC ACGTAGGATC AAGCCTATCA TCACCAGTTG GAAAAACAGG CTCCCGAAAC
CGGTGTTCCG TCACCGCAAG GGGCAAGGGC CGTATCCATC CTTGCCCCTT TCCCGGGCGT
GTCGCGCGCA CCGCTCCCGC CGCCGAAATC GTCGGCGAGG CGGATATTTC CCGGCTCTAT
CCCGACGGTT TTCCCGGCTG GGAACTGGAG CATGGCGGGG AGCTGGAAAC CTCGCTGATG
CTGGCGCTTT ACCCGACGCT GGTCGATCTG AGCCGTGCAG TCGATGTCGA GCCGGCGCAA
TTCCCGCCTT ACGACGTCTA CCCCGCCAAG CCGGAATGGA CGCCCGCATC GGGCACGCTG
TCCTCGCCCA AGGACGCCTC GGCCGAGAAG GGCGAGTTGC TGCTCGAGGT CTGCACCAAA
GGCATCGTCG CCGCATTGCG GGCAGAGTTC GGCACCCCCT GCCCCGCCTG A
 
Protein sequence
MGSGWAIFGL GLSRWKAGQV SPAHVGSSLS SPVGKTGSRN RCSVTARGKG RIHPCPFPGR 
VARTAPAAEI VGEADISRLY PDGFPGWELE HGGELETSLM LALYPTLVDL SRAVDVEPAQ
FPPYDVYPAK PEWTPASGTL SSPKDASAEK GELLLEVCTK GIVAALRAEF GTPCPA