Gene Pden_3409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3409 
Symbol 
ID4581965 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp553476 
End bp554615 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content63% 
IMG OID639770723 
Productcreatinase 
Protein accessionYP_917176 
Protein GI119386121 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0006] Xaa-Pro aminopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCGGC GCCAGGACGA CATGCGCCGC TGGATGGCCG GGAACGGCGT CGATGCGGCA 
CTGTTCACCT CGTATCACTG CATCAACTAT TATTCGGGCT GGCTCTACTG CTATTTCGGC
CGCAAATACG GCATGGTCAT CACCCAGGAC GCGGCGACCA CCATCAGCGC CGGCATCGAT
GGCGGTCAGC CGTGGCGGCG CAGCTTTGGC GGCAACGTCA CCTATACCGA TTGGCGGCGC
GACAATTATT TCCGCGCGGT GCGGCAGCTG ACCCCCGGCG TCAAGCGGCT GGGAATCGAG
TTCGACCATG TCAACATGGA CTTGCGCCGC CAGCTTGAGG CAGCCCTGCC GGGGGTGGAA
TTCGTCGATG TCGGCCAGCC CTCGATGTGG ATGCGCTCGA TCAAGTCGGC CGAGGAACAC
AAGCTGATCC GCGAGGGCGC GCGCATCTGC GACGTGGGCG GCGCGGCGGT GGCGGCTGCG
GTCAAGGCGG GCGTGCCCGA GCACGAGGTC GCCATCGCCT CGACCAATGC CATGATCCGC
GAGGTCGCCG CCTCCTTCCC CTTCGTCGAG CTGATGGATA CCTGGACCTG GTTCCAGTCC
GGCATCAACA CCGACGGGGC GCATAACCCG GTGACGAACA AGAAGATCGC ATCGGGCGAG
ATCCTGTCGC TGAACTGCTT CCCGATGATC TTCGGCTATT ATACCGCGCT GGAACGCACG
ATGTTTTGCG ACAGCGTGGA CGATGCCAGC CTCGACATCT GGGAAAAGAA CGTCGCCGTG
CATCGCCGGG GCCTGGAACT GATCAAGCCC GGTGCGAAAT GCAACGAGAT CGCATTGGAG
CTCAACGACA TGTACCGCCA GTGGGATCTG CTGAAATATC GCAGCTTCGG CTATGGCCAC
TCCTTCGGCG TCCTGAGCCA CTATTACGGG CGCGAGGCCG GGGTCGAGCT GCGCGAGGAC
ATCGAGACCG AGCTGAAGCC CGGCATGGTG GTCTCGATGG AACCGATGGT GATGTTGCCC
GAGGGTGCGC CCGGCGCGGG CGGCTATCGC GAGCATGACA TCCTGATCGT GACCGAGGAC
GGGGCCGATA ACATCACCGG GTTCCCCTTC GGCCCCGAGC ACAACATCAT CCGCAACTGA
 
Protein sequence
MQRRQDDMRR WMAGNGVDAA LFTSYHCINY YSGWLYCYFG RKYGMVITQD AATTISAGID 
GGQPWRRSFG GNVTYTDWRR DNYFRAVRQL TPGVKRLGIE FDHVNMDLRR QLEAALPGVE
FVDVGQPSMW MRSIKSAEEH KLIREGARIC DVGGAAVAAA VKAGVPEHEV AIASTNAMIR
EVAASFPFVE LMDTWTWFQS GINTDGAHNP VTNKKIASGE ILSLNCFPMI FGYYTALERT
MFCDSVDDAS LDIWEKNVAV HRRGLELIKP GAKCNEIALE LNDMYRQWDL LKYRSFGYGH
SFGVLSHYYG REAGVELRED IETELKPGMV VSMEPMVMLP EGAPGAGGYR EHDILIVTED
GADNITGFPF GPEHNIIRN