Gene Pden_3395 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3395 
Symbol 
ID4581951 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp540885 
End bp541514 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content65% 
IMG OID639770709 
Productputative transposase 
Protein accessionYP_917162 
Protein GI119386107 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.175347 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCGGT CCAAGCTGGA GATCGCTGAC ATCTTCCGAC GATACGGCCC CGCGTGGCGG 
CGGGCCAATG CCGGGCATGT CAGCCTGACC CAGCTGAAGG TGATGTCGGC CATCGAGGCC
TGCCGGATCG AGGCGCTTGG CGGGCATGTG GCTGCCTGCG GCAAGTGCGG CCACCACCAT
ATTGCCTATA ACAGCTGCAA GAACCGGCAT TGCCCGAAGT GTCAGGCACC GGCAGCGCGT
GACTGGATGG AGGCGCGCGC CGATGACCTG CTGCCCGTCG AGTATTTCCA CGTCGTCTTT
ACCCTGCCGG CCAGGATCGC GCAGATCGCC TTCTGGAACA AGAGGGCGGT GTGTAGGCTG
CTGTTCAAGG GTGAGGGCAT GACTGCCATC GGTCCGAAGG AATGCCCGAA CGCGGAAACG
GTGACGACCA TCGCCGCCGA TCCAAAGCGG TTGGGTGCGC GGATCGGCAT GACGGCGGTG
CTGCACACCT GGGGATCGGC GCTGACACAT CATCCGCACA CCCTGCGCGA ACCATGTCCT
TGCTGCGGCG GCCCGATGCG CATCGTCGAG ATCTTCCGTC GCGGGCAAAA ACCCTCATCC
CGCGATCCGC CCCGGGAGAA AGCCGCATGA
 
Protein sequence
MTRSKLEIAD IFRRYGPAWR RANAGHVSLT QLKVMSAIEA CRIEALGGHV AACGKCGHHH 
IAYNSCKNRH CPKCQAPAAR DWMEARADDL LPVEYFHVVF TLPARIAQIA FWNKRAVCRL
LFKGEGMTAI GPKECPNAET VTTIAADPKR LGARIGMTAV LHTWGSALTH HPHTLREPCP
CCGGPMRIVE IFRRGQKPSS RDPPREKAA