Gene Pden_3348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3348 
Symbol 
ID4581905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp505686 
End bp506120 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content67% 
IMG OID639770664 
Productmethyltransferase type 12 
Protein accessionYP_917117 
Protein GI119386062 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.349655 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACCGC GGATTTCGAA CCGGATCGCG TCTTTCGTAG ACGCTCTGCC GCTGGCGCCG 
AGCCATCGGG TGCTCGAGAT AGGCTGCGGT CCGGGCGTGG CCGCCCGCGA GGTTTCCCGC
CGTGTCGGGA ACGGCTTCGT CCTGGCCATC GACCGCTCGG CCAAGGCGAT CGAAAGCGCG
GTTGCCGGAT CGAAGGCGGA AATCGCCACC GGCCGCCTGC GGTTCCTGCG AGCGGCGATC
GAGGATTTCG CATTGCCGCC GGGTGAAGAG CCTTTCGACA TCGCCTTTGC GATGCGTGTG
GGGGCGCTGG ATGGACGCCA CCCGGATATC GAGCAACGCG CCCTTGAACG ATTGCGGGCG
GTATTGAAAC CGACGGGGCG GCTGTTCATC GACACGGGGC ATCCTCTTCG GGAGATCGGG
CTGCGAGGGC GGTGA
 
Protein sequence
MAPRISNRIA SFVDALPLAP SHRVLEIGCG PGVAAREVSR RVGNGFVLAI DRSAKAIESA 
VAGSKAEIAT GRLRFLRAAI EDFALPPGEE PFDIAFAMRV GALDGRHPDI EQRALERLRA
VLKPTGRLFI DTGHPLREIG LRGR