Gene Pden_3325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3325 
Symbol 
ID4581884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp485821 
End bp488112 
Gene Length2292 bp 
Protein Length763 aa 
Translation table11 
GC content57% 
IMG OID639770644 
Producthypothetical protein 
Protein accessionYP_917097 
Protein GI119386042 
COG category[S] Function unknown 
COG ID[COG4694] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACTC ATATCAATCT CGTCAGAAAT GTGGGCCGAT TTGACTCCGT ATCTGCAGGC 
GCCAACCTTC CGTTTCAGAA ATTTACCGTG CTTTACGGCG AGAACGGGCG TGGCAAGACA
ACCCTTTCCG CCATTCTCAA ATCCCTGGCA ACGAATGACC CGCTTCTTAT CGAACAGCGG
CACAGGCTGG GCGCGCAGCA CCCGCCTCAC GTCGTTGTGG CGAGATCTGC CAACCAGCAT
GTCTTTCAGA ACGGTGGCTG GTCGGCATCA GATGACCGGA TCGTTGTTTT CGACGATGAC
TTCGTTGCCC AGAATGTTTG CTCCGGGATC GAGATTGCCA GCGAACACTG CAAGAATCTT
CACGAACTGA TTATCGGTGC GCGGGGAGTC GCCCTGAATG AAACGCTCCA GCAGCACATC
AGGGAAATCG AAGAGCACAA TGCCGAGATA CGCAAGCTCG GCGGTAACAT TCCGGCCAGC
GTGCGCGGCG CGATGAATGT CGATCAATTC TGCGCGCTCG AAAAGCGCGA CGACATTGAT
GCCGCGATCG CCGAAACGGA ACGCAAGATC AATGCTGCCA AGGCTTCTGA CGAGGTTCAG
AAGCGTGAGT CGTTCAAGAA CTTTGCGCTG CCCGAGTTCG ATATCGACGG ACTCAACGGG
CTTTTGTCCC GCGGCTTGCC GGAGCTGGAA GCGGAAGCCG CTCAAAGAGT CCGTGATCAT
CTGTCCCATG CCGGTCGCAA CGCAGAAACC TGGGTAGCCG AAGGGCTGCC GCGTGTCGCC
GCGATGGCCG AGGCAACAGA CCGGAACGAT TGCCCGTTTT GCGCCCAGAG CCTGGACGCG
TCCCCTGTCA TCCGCCACTA TCAGGCGTAT TTCAGCGACG CTTATGCCAA GCTCCGCGAG
GACGTGACCG AGGCGGGTAA AGCACTCACC CGTGATTTTG GCGGTGATAT CGCCGCTGCC
TACGAACGAG CCATTGCGGC TATCTCTGAA TCCCGTAACT TCTGGGGCCG GTTCGCCGAT
ATCCCTGAGC AAGAATTCGA CACGGCGGCC ACCGTCCGCG CCTTAAACGC GGCGCGCGAA
GCCGTGCGCC AACAGCTTTT GGCAAAGCAT GCGGCGCCGT TTGAAATCGC GCCCCTCAGC
GAGGAAACCC TGAATGCGAT CGGGGCTTAT GATGCGCTTC GCCAGCAACA TATCGAGGCG
ATGCGCGTGT ATGAGGAGGC GAACGCCAAA ATCGCGCTGA TAAAGGAGCA GGCAGCTTCT
TCAAATCTTT CGGCCCTGCA AACCGATCTG GATAATCTAA AGCGCATCAA GGTGCGCCAC
AGCGATCCCT ACGATGAGAT CTGTCGCAAA TACCTCGAAG CAGCGGCGAA AAAACAGAAA
ACCGAACGGG CACGGGATGC TGCGCGCGAG GCCCTTAACC AGTATCAGCA GCAGGTGTTC
CCCCGATACG AAGCGGCGAT CAACACTTAT CTCGGCAAAT TTCATGCGGG ATACCGGCTA
GGCAGCGTTT CCTCCCGAAA CACCCGATCC GGTGCGACAT GTGATTACAA GGTTCTGATC
AACAATGTTC CCGTTTCCTT ATCAGCCAAT GCAGGCCCCT CATTCAGGAA CACATTGAGC
GCCGGAGACA GGAATACACT GGCGCTCGCA TTCTTCTTCG CATCGTTGGA ACAGGATTCC
GATCTGGCGT CGAAGATCGT TGTGATCGAC GATCCGATGA CGAGCCTTGA TGAGCACCGT
TCACTGACTA CGCGGCAGGA AATCATCGCG CTGACAGGCC GGGTTACTCA GGTGATCGTC
ATGTCCCATG AAAAGCCGTT TCTGTGTGGG CTGTGGGAAG CGGCAAGCCG CATTAATCGC
GCGGCTATAA TGGTCATGCG GAATGGAGAC GGCTCGACAC TCGCCGAATG GAATGTCAAT
GACGACTGCA TCACCGAGCA TGACCGGCGA CACAGGCTTG TTGCCGAGTT CCTGAACAGC
TACTCAGCCA CGCAGGAGAG GAACGTTGCC GTGGCGCTCC GGCATATTCT CGAAGCCTTT
GTCAGGGTCG CCTATCCTGA GCACTTCCCT CCCGGCTCCA TGCTTGGCCC GTTCGTCGAT
AAGTCCCGAC AGCGGATCGG TGAACAGAAC GAGATTCTCT CAAAGGCCGA TACGGTTGAA
CTGCGCGCGA TACTGGACTA CGCGAACAAG TTTCATCACG ACACCAATCC GGCCTACGAG
ACTGAACAGA TCAACGATAC CGAGCTGGAA AGTTTCGCCC GCCGGACTCT GGCTTTCACC
AAGCGCACTT GA
 
Protein sequence
MLTHINLVRN VGRFDSVSAG ANLPFQKFTV LYGENGRGKT TLSAILKSLA TNDPLLIEQR 
HRLGAQHPPH VVVARSANQH VFQNGGWSAS DDRIVVFDDD FVAQNVCSGI EIASEHCKNL
HELIIGARGV ALNETLQQHI REIEEHNAEI RKLGGNIPAS VRGAMNVDQF CALEKRDDID
AAIAETERKI NAAKASDEVQ KRESFKNFAL PEFDIDGLNG LLSRGLPELE AEAAQRVRDH
LSHAGRNAET WVAEGLPRVA AMAEATDRND CPFCAQSLDA SPVIRHYQAY FSDAYAKLRE
DVTEAGKALT RDFGGDIAAA YERAIAAISE SRNFWGRFAD IPEQEFDTAA TVRALNAARE
AVRQQLLAKH AAPFEIAPLS EETLNAIGAY DALRQQHIEA MRVYEEANAK IALIKEQAAS
SNLSALQTDL DNLKRIKVRH SDPYDEICRK YLEAAAKKQK TERARDAARE ALNQYQQQVF
PRYEAAINTY LGKFHAGYRL GSVSSRNTRS GATCDYKVLI NNVPVSLSAN AGPSFRNTLS
AGDRNTLALA FFFASLEQDS DLASKIVVID DPMTSLDEHR SLTTRQEIIA LTGRVTQVIV
MSHEKPFLCG LWEAASRINR AAIMVMRNGD GSTLAEWNVN DDCITEHDRR HRLVAEFLNS
YSATQERNVA VALRHILEAF VRVAYPEHFP PGSMLGPFVD KSRQRIGEQN EILSKADTVE
LRAILDYANK FHHDTNPAYE TEQINDTELE SFARRTLAFT KRT