| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3297 |
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| Symbol | |
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| ID | 4581858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | - |
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| Start bp | 462189 |
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| End bp | 464129 |
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| Gene Length | 1941 bp |
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| Protein Length | 646 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639770618 |
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| Product | heavy metal translocating P-type ATPase |
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| Protein accession | YP_917071 |
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| Protein GI | 119386016 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01512] heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00745206 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.534464 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGCT TTCCACCCGT TGACCTGTCA CTGACCCTTT CGCTCGTCAC CGTGCTCGGC
ATGGCGATGG CGGCAGCCGG CAGATGGCTG CCCAGCGGAG CTTTCGACGC TCTGGAGCTA
CCGGGGCTGG TGCTAGTCTA TCTGGCTGGC GGCCTGCCCA CCGGCTGGCG CGCGCTGTCG
GAACTGTGGC GCGCGCGCGT GCTTGACATC GACCTGTTGA TGATCGTCGC GGCAATCGCC
GCCGCAATCG TCGGCGCCCC GTTCGAGGGT GCGGTGCTGC TGACGCTGTT CAGCATCTCG
ACCACGCTGG AGGAACGCGC GCTTGGCCGC GCCCGCCGCG CCATCGAGGC GCTGATGGCG
CTGCGCCCCG AGACCGCCTT GCGCAAGACC GCCAACGGCG CTGTCGAGGA AGTTCCCGCC
GAGGTGCTGG CCGTCGGCGA TGTGGTGGTG CTGCGCCCCG GCGCCCGGGT GCCCAGTGAT
GGCGTGGTCG TCACCGGGCG CGGCGGCATC GACGAGGCCA ACATCACCGG CGAATCCATG
CCCGTGTCAA AAGAGGCCGG TGCGCAGGTG TTCGAGGCCA CGATCAATCT GGACGGCGTG
CTGGAGGTCG AGGTCACGCG CAGCGTCAGC GACAGCACCA TCGCCCGCAT GATCCGCCTG
GTGACCGAGG CGCAGGCCGC CCGCGCACCC TCAGAGCGGT TCAGCGAATG GTTCGGCCAG
CGCTACACGG TCGCGGTGCT GGCGGGTGCG GTGATCGCCT TTGCCACGTT CTGGTGGCTG
GGCGGCGACT GGGAACTGGC GCTTTACCGC GCCGCCACGC TGCTGGTCGC CGCCAGCCCC
TGCGCCATCG TCATTTCCGT CCCCGCCGCG ATCCTGTCGG CCCTGTCGGC GGCGGCGCGC
GGCGGTGTTC TGTTCAAGGG CGGCGGCGCG CTGGAGACGC TGGCCGAGGT CGATATCTTC
GCCTTCGACA AGACCGGCAC CCTGACCACC GGCCGCGCCG AGGTGACGGA AATCGTCGCG
CTGGATGGCG ACGAGGCCGG GTTCCTGTCG CTGCTGGCGG GGCTGGAGGC GCATTCCGAG
CATCATATCG CCGCCGCGAT CCGCCGGGAA GTTGCCACGC GCGGGCTTGA TCCAGCAATC
GTTGCCGATG TGAACGCCCG GCCAGGCATC GGTATCGAAG GGGCCGATGC ACTTGGCCCG
GTTTGGGCGG GCAATGCCTA TCTTGCCGAG GACATGAAGG CTGCAACGGA TCACCCCGCG
TTGCAGGCGC TGGCGGATGG CGCCAATACG GTCGTCTATC TGGGTCGCGG CGCCACCCTG
CTGGGCGCCG TCAGCGTAGC GGACGAGGCA CGGGCCAGTT CCGCAGGGGC GATCACGGCC
CTGCGCGACA GTGGTGTCCG CCGCATCGTC ATGATGACCG GGGATCGCAG GCCGGTGGCG
CTGCGCATCG GCGCCCGGCT TGGGCTGAGG CCCGAAGAGA CTCACGCCGA AATGCTGCCA
CAGGACAAGG TTCGCGCGGT TGGCGAACTG GCCGCAACCG GCCGCGTTGC CTTTGTCGGC
GACGGCGTGA ACGACGCCGC GGCGCTGGCC CGCGCCGATG TCGGCATCGC CATGGGCGCG
GCCGGGTCCG AGGTGGCGCT TCAGGCCGCC GATGTGGCGC TGCTGTCCGA GGATATGGAG
CGGCTTGCGG ACGCGCACCG CCTGTCGCGC CGAACGTCAA GGGTGATCCG GCAGAACCTG
ACCTTCGCCA TCGGCGCCAT GGTGGTTCTG GTCATCGGCG GGCTGTTCTT CGATCTGCCG
TTGCCGCTGG TGGTGATCGG CCATGAAGGC GGCACCGTGC TGGTGGTGCT GAACGGGCTG
CGGTTGTTGT CGGACCCGAT CCGCCGGCCG AAGGCGTCTG TTGCCGGACA GGCGCCGACG
GGTGTCGCGC GGCCGGCCTG A
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| Protein sequence | MKRFPPVDLS LTLSLVTVLG MAMAAAGRWL PSGAFDALEL PGLVLVYLAG GLPTGWRALS
ELWRARVLDI DLLMIVAAIA AAIVGAPFEG AVLLTLFSIS TTLEERALGR ARRAIEALMA
LRPETALRKT ANGAVEEVPA EVLAVGDVVV LRPGARVPSD GVVVTGRGGI DEANITGESM
PVSKEAGAQV FEATINLDGV LEVEVTRSVS DSTIARMIRL VTEAQAARAP SERFSEWFGQ
RYTVAVLAGA VIAFATFWWL GGDWELALYR AATLLVAASP CAIVISVPAA ILSALSAAAR
GGVLFKGGGA LETLAEVDIF AFDKTGTLTT GRAEVTEIVA LDGDEAGFLS LLAGLEAHSE
HHIAAAIRRE VATRGLDPAI VADVNARPGI GIEGADALGP VWAGNAYLAE DMKAATDHPA
LQALADGANT VVYLGRGATL LGAVSVADEA RASSAGAITA LRDSGVRRIV MMTGDRRPVA
LRIGARLGLR PEETHAEMLP QDKVRAVGEL AATGRVAFVG DGVNDAAALA RADVGIAMGA
AGSEVALQAA DVALLSEDME RLADAHRLSR RTSRVIRQNL TFAIGAMVVL VIGGLFFDLP
LPLVVIGHEG GTVLVVLNGL RLLSDPIRRP KASVAGQAPT GVARPA
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