| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3253 |
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| Symbol | |
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| ID | 4581816 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 416027 |
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| End bp | 417628 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639770576 |
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| Product | protein of unknown function DUF894, DitE |
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| Protein accession | YP_917029 |
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| Protein GI | 119385974 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0373 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.254586 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAGA CACTTGCCGT ATTCCGCAAC CGGACTTTCC GTGGACTCTG GCTCGGGACG
GTGGCCTCGA ACATGGGCGG CTTGGTGCAA CAGGTCGGCG CGGCTTGGCT GATGGCGACG
ATGACCAGTT CGGCGACGAT GATCGCGCTG GTTCAGGCCT GCGTCACCCT GCCGATTATG
CTCGGCTCCT ACCCCGCCGG GGTTCTGGCC GATTGCCGCG ACCGGCGCAG GATCATGCAG
GTGGCGCAGA TCTTCATGGC GGTGGTATCG GCGGCCCTGG CGGTTCTGGC CTGGATGGGG
CAGGTCACCC CGGTTGTGTT GCTGGTGTTC ACGGCGCTCG TCGGCTGCGG AACCGCGCTG
CAATTCCCGG CATGGCAGTC CTCCATCGGC GGGCTGGTGG TGCGGGACGA ACTGCCGGCG
GCGATTTCCG CCAATGCGAT GGGCACCAAT CTGACCCGCA GCCTCGGCCC GGCCCTTGGC
GGCGCGATCG TCGCCGCTGC GGGATCGGCC ATGGCCTTCG CCGTGAACGC CCTGTCCTAT
CTGGCGGTCA TCGTCGCATT GTGGCGCTGG CGGCCTGCGC GGTCCGAAAA CGATCTGCCG
GCTGAGAGCC TTTTCCCTGC GATGCGCGCC GGTGTGGTGT ATTGCCTGTC TTCAGGCGAC
AAGTTGGGGG CGATCTGGCG TGGATTTCTG TTCTGCCTGG CGGCGATCGG GGTGCAGGCC
CTGCTGCCCG CGCTGGTGCG CGACGAGATC GCGGGTGGCG CCTCTATCTA TGGGATCATG
CTGGGGGCCT TCGGGGCGGG TGCGGTGGGT GCGGCGCTGG TCAGCACCCG CCTCCGCGCC
CGCTACGGGC TGGAGACCAC CTGCCGGCTC GGCTTCGTCG CCTTCGCGCT TGCCGTCGCG
GCGCTGGCCA TTGCGCCGGG GCTTGGCCTT GGGATCGCCG CGCTTCTGGT CTGCGGCGCA
GCCTGGCTGA CGGTGCTGTC TTTGGTGAAC ATCTCGATTC AGGTCTCGAC GCCGAAATGG
GTTCTGGGCC GGATGATGGC CATCTACATG ACGGCGATCT TCGGGGGCAT GACGCTGGGA
AGCTGGCTCT GGGGCTACGT CTCTACCCTG GGCGGCCTGC ACCTCGCCCT GCTGCTGTCG
GCCGGCCTGC TGCTGCTCGG TGCGGCCTGG GGGCTTTGGG CGCCGCTGGT CGCCGCCGAG
CCGGACAGCA TACTGCCGGC AGAGCTCCCC GCCTCACCGC AGCCCCGCGT TGCGCTGGGC
CATGACAGCG GTCCGGTGCG GATTTCGGTG GAATATGTGA TCCCGGTCGA GCGGGAAGGC
AGCTTCCTGA CCGTAATGGA GGCGCGCCGC CGCAGCCGCG CCCGGTCAGG GGTGTCGAAC
TGGTCGCTGT ACCACGATGT CGAAGCCCCC TCGCAATGGA TCGAGACCTA CGGTTTCGCC
ACCTGGGGGG ACTATCTGCG CCAGCGTGCG CGCAAGACGC GACAGGACGA GGCCATAATC
GCGCAGTTGC ATGCGCTCCA TCACGGCGAT CATCCGCCGC AGGTGCGCCG GATTGTAGGG
ACTCGCCGTC CGCAGACCCT GCGGGCACCA CCTTTGCCGT GA
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| Protein sequence | MSQTLAVFRN RTFRGLWLGT VASNMGGLVQ QVGAAWLMAT MTSSATMIAL VQACVTLPIM
LGSYPAGVLA DCRDRRRIMQ VAQIFMAVVS AALAVLAWMG QVTPVVLLVF TALVGCGTAL
QFPAWQSSIG GLVVRDELPA AISANAMGTN LTRSLGPALG GAIVAAAGSA MAFAVNALSY
LAVIVALWRW RPARSENDLP AESLFPAMRA GVVYCLSSGD KLGAIWRGFL FCLAAIGVQA
LLPALVRDEI AGGASIYGIM LGAFGAGAVG AALVSTRLRA RYGLETTCRL GFVAFALAVA
ALAIAPGLGL GIAALLVCGA AWLTVLSLVN ISIQVSTPKW VLGRMMAIYM TAIFGGMTLG
SWLWGYVSTL GGLHLALLLS AGLLLLGAAW GLWAPLVAAE PDSILPAELP ASPQPRVALG
HDSGPVRISV EYVIPVEREG SFLTVMEARR RSRARSGVSN WSLYHDVEAP SQWIETYGFA
TWGDYLRQRA RKTRQDEAII AQLHALHHGD HPPQVRRIVG TRRPQTLRAP PLP
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