Gene Pden_3243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3243 
Symbol 
ID4581807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp408296 
End bp409462 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content66% 
IMG OID639770567 
Productaldo/keto reductase 
Protein accessionYP_917020 
Protein GI119385965 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.609699 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.672659 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAACG AACAGAAACT GAAGATCGGG CGGCGGGGTT TCCTGGGTGC GGCGGGCGGC 
CTGGCCGCGG CGCCGCTGCT CGTCTCGACC GGCTCCGGGG TCTCCGCACA GGAAGCCGCG
CAAGGGACGG GCATCTATGC CACCGCCCCC TCGTTGAGTG GTCGGCGGAT GCTGGGAACG
CTGGAGGTGT CGAGCATCGG CCTTGGCGTT CAGAACATGC ACCGCACCTA TCAGACGACG
ATCCCGTCGC GGCCAGAGAT GATCAACATC ATCCGCACCG CCCATGACCG TGGCGTCACG
TTCTTCGATA CAGCCGAAGC CTATGGCCCG CATGAATGCG AGCGGATTCT GGGCGAAGCC
GTTGAGCCGT TCCGGGACGA GGTGGTGATC ACCTCGAAGT TCGGCTGGAA CATCGACCTG
GAAACCGGCG AGCGGCTGCC GGGCCTGAAC AGCAAGCCCG ATCACATCAA GCTGGCGGTC
GACGGTATGC TGAAGCGGCT GCGCACCGAC CGCATCGACC TGCTCTATCA GCACCGCGTC
GACCCCGAAG TGCCCATCGA GGATGTCGCC GGCGCGGTCA AGGATCTCGT GGACGAGGGC
AAAGTCCTGC ATTGGGGGCT TTCGGAGATG GGGCTCGGGA CGCTGCGCCG CGCCCATGCC
GAACTGCCCG TGACGGCCGT CCAGAGCGAG TATTCGATGC TCTGGCGCGG GCCGGAAGAT
GAGGTGCTGT CCGTCTGCGA GGAACTCGGC ATCGGCTTCG TGCCGTGGAG CCCGCTCGGT
GTCGGCTTCC TGACCGGCGC GATCGACGCC GGCACCCGCT TCGCCGAGGG CGACATCCGT
GGGGTTGAGA CACGCTTCGC GCCTGAGAAC CTGCCGGCGA ACCTGGCGCT GGTGGCGCTG
CTGAAGGATT GGGCCGGCAG GAAGCAGGCC ACCGCCGGAC AGATCGCGCT CGCCTGGCTT
CTGGCCCAAA AGCCCTGGAT CGTCCCGATC CCCGGCACGA CGCAGATGGC GCATATGCTG
GAGAACATCG GCGCGGCCGC GATCAGCTTC ACGCCCGACG AGATCTCCGA ACTCAACATG
GCCGTCGCGG CGATCGAGCT GCGCGGCCAA CGTCTCCCCG ACGCCGTTCT GGCCTTCTCG
AATGTCGAGG CTCCGGCAAG GAATTAA
 
Protein sequence
MTNEQKLKIG RRGFLGAAGG LAAAPLLVST GSGVSAQEAA QGTGIYATAP SLSGRRMLGT 
LEVSSIGLGV QNMHRTYQTT IPSRPEMINI IRTAHDRGVT FFDTAEAYGP HECERILGEA
VEPFRDEVVI TSKFGWNIDL ETGERLPGLN SKPDHIKLAV DGMLKRLRTD RIDLLYQHRV
DPEVPIEDVA GAVKDLVDEG KVLHWGLSEM GLGTLRRAHA ELPVTAVQSE YSMLWRGPED
EVLSVCEELG IGFVPWSPLG VGFLTGAIDA GTRFAEGDIR GVETRFAPEN LPANLALVAL
LKDWAGRKQA TAGQIALAWL LAQKPWIVPI PGTTQMAHML ENIGAAAISF TPDEISELNM
AVAAIELRGQ RLPDAVLAFS NVEAPARN