Gene Pden_3236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3236 
Symbol 
ID4581800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp402410 
End bp403183 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content67% 
IMG OID639770560 
ProductNmrA family protein 
Protein accessionYP_917013 
Protein GI119385958 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0702] Predicted nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAGG ATTCAGGTGT GCTTCTGGTC GTGGGCGCGA CCGGCAGCAT CGGGCAGCGT 
GTCGTCACGG CGGGTCTGGC GCATGGCTAT ACCGTGCGCG CGCTGCTGCG CGATGCGTCT
CGCGCACAGG ACTTCCCGGC AAATGTCCAG ACCGTCGTGG GTGACATGAC CCGGCCCGAG
ACCCTTGCGG CTGCGGTCGA TGGGGTCGGT GCGATCGTGT TCACCCATGG CAGCTACGGC
AATCCGGCGG CTGCGGAGGC GGTGGATTAT GGCGCCGTGC GCAATGTGCT GGCGGCTCTT
GGCAACCGGA CGGCACGGAT CGCGCTGATG TCCACCATCG GCGCGACGGA TCGCCGGGGT
TCGCATGACT GGAAGCGGCG GGGCGAACGG CTGGTGCGCG CCAGCGGGTT TCCCTATACC
ATCGTTCGCC CGGCCTGGTT CGACCACAAC CGGCCCGACC AGTTGAAGCT CCTGATGTTG
CAGGGCGACA AGGATCTGGC CGGCAATCCC TCGGACGGGG TGATCGCCCG GCGCCAGATT
GCCGAGGTGC TGGTGCGCAG CCTGTCCTCG GAGGCCGCCC TGCGCAAGAC TTTCGAGCTT
CATGCCGAAA CCGGGCCGGA GGAGGAGGAT TTCGACATGG TGTTTGCGCC GCTGGCCGCC
GATCCTGCCG ATGCGCTGGA CGGTGCGAAG GACAAGGCCA ACATGCCGCT CGCAGACGAA
CCCGCGCAGA TTCGTGCGGA ACTTGAAGCG GTGCGGGGTC GCGCGGCGGG CTGA
 
Protein sequence
MSKDSGVLLV VGATGSIGQR VVTAGLAHGY TVRALLRDAS RAQDFPANVQ TVVGDMTRPE 
TLAAAVDGVG AIVFTHGSYG NPAAAEAVDY GAVRNVLAAL GNRTARIALM STIGATDRRG
SHDWKRRGER LVRASGFPYT IVRPAWFDHN RPDQLKLLML QGDKDLAGNP SDGVIARRQI
AEVLVRSLSS EAALRKTFEL HAETGPEEED FDMVFAPLAA DPADALDGAK DKANMPLADE
PAQIRAELEA VRGRAAG