| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3230 |
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| Symbol | |
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| ID | 4581794 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 396188 |
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| End bp | 397768 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639770554 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_917007 |
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| Protein GI | 119385952 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCCTG AATCCCGACA GTTTTGGAGC AAGTCGATCG TCACCGAAGC GATTGGCGGA
ATCCCCTACC GGATCTATGC TGATCGGCCG CACCGGATCA GTGAATTGTT TTCCTTTGCC
AGCTTCTGGG GCGACCGCCC TTACGTGATC CAGGGTGACC GGGTCCTTAC TTTCGCGGGG
TTGCGAGATG CGTCCGGATC GAAGGCTCTG CAGCTGCAGC GCTCGGGGAT CGCCGCCGGC
GACCGGGTGA TGATCCTCGG CTGGAACAGC CCGGACTGGG TCGTCAATTT CTGGGCGGTT
GTAAGGCTGG GGGCGGTTCC GGTCCTGGGC AATGCTTGGT GGAGCCCCGA GGAAATCGAA
TATGCCATCT ACTTCACCGA ACCAAAGCTA GTGCTTGCCG ATGACCGCTG CGCCGGCAGG
GTCTCGCAAT CGCTACTGAC CGAAGCCTGG GGCGGAGAGG CCGGGACGGG CGAGGCCCCG
GATGTGACGG TCCCCGATGA CGAGAACGCC CCGGCCGTCA TCATCTTCAC CTCGGGAACC
GAGGGTCGAG CCAAAGCCGT CGTCCTGGCG CATCGGTCGT TCATCGCGTC GATGATGATG
ATGATGCATA TCACGCGGCG CCTGCCTTAT GACGTAAGTG CGCCCAAATC CGAGATTTGC
CTGCACACCG GCCCGCTTTT CCATATCGGC GGTCCGCATG CTATGATGCG TGGCGTGGTC
TCCGGCAACA CGCTGGTGTT CCCCTCGGGC CGGTTCAGCA CCTCCGAGGC GCTTGAACTG
ATCGAGAAGC ACCGGATCGA GCGCTGGACA GCCGTGCCCA CGATGCTGAC GCGCTTGCTG
GACGACGAAG GGATCGCGAC CCGCGACCTT GGCAGCCTGC GCTCGATCGG TATGGGCGGC
GCGCCGGTCC ATCGCGAATT GCTGGACCGG GTACGTAAGC AGCTACCGGG CGTCGATGCG
CGGGTGGCCA TCGGCTACGG GCTCAGCGAA AATGCCGGCC AGGCGACCGC CGCCTCGGCT
GAAAATGCAC TGCGCAAGCC TGGCTCCAGC GGTCGGCCAT TGCCTCTGGT CGAGATCAGT
TTCAAAGAGC GCGAGGGCCT GCCCGACGGC GAGATCCTTC TGCGTTCGCC GACGCAGATG
CTGGGCTATT TCGGCAATCC GAATTCTCCG ATAGATGCTG ATGGCTGGCT GCATACCGGC
GATCTGGGGA AACTGGATGA CGAGGGCTTG CTGTGGATCA CCGGGCGCTG CAAGGACATC
ATCATCCGGG GGGGCGAAAA TATCGCGCCC GCGGCGGTCG AGCGCGCCCT GACCGGCATT
TCCGCCGTGG CAGAGGCGGC AGTCCTTGGC ATCCCGCATC CCGACCTGGG CGAAGAGGTC
GCGGCCTTCG TGGTCATCCG CGAGGATTCG GAGGCGACGG CCGAAACGCT TTCCGCCGAA
TTGCGCCGGA CGCTTGCCTC CTTCGCTGTT CCCAGCCGGT GGCACATCCA ATATGAGCCG
CTTCCGACCA ACCAGACCGG AAAGGTGGAA AGAAAAGCGC TGCTGGAGCT TCTGCGTGAG
GGGCCGCAGC CCGAGGAGTG A
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| Protein sequence | MTPESRQFWS KSIVTEAIGG IPYRIYADRP HRISELFSFA SFWGDRPYVI QGDRVLTFAG
LRDASGSKAL QLQRSGIAAG DRVMILGWNS PDWVVNFWAV VRLGAVPVLG NAWWSPEEIE
YAIYFTEPKL VLADDRCAGR VSQSLLTEAW GGEAGTGEAP DVTVPDDENA PAVIIFTSGT
EGRAKAVVLA HRSFIASMMM MMHITRRLPY DVSAPKSEIC LHTGPLFHIG GPHAMMRGVV
SGNTLVFPSG RFSTSEALEL IEKHRIERWT AVPTMLTRLL DDEGIATRDL GSLRSIGMGG
APVHRELLDR VRKQLPGVDA RVAIGYGLSE NAGQATAASA ENALRKPGSS GRPLPLVEIS
FKEREGLPDG EILLRSPTQM LGYFGNPNSP IDADGWLHTG DLGKLDDEGL LWITGRCKDI
IIRGGENIAP AAVERALTGI SAVAEAAVLG IPHPDLGEEV AAFVVIREDS EATAETLSAE
LRRTLASFAV PSRWHIQYEP LPTNQTGKVE RKALLELLRE GPQPEE
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