| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3229 |
|---|
| Symbol | |
|---|
| ID | 4581793 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008687 |
|---|
| Strand | + |
|---|
| Start bp | 394918 |
|---|
| End bp | 396066 |
|---|
| Gene Length | 1149 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639770553 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_917006 |
|---|
| Protein GI | 119385951 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2030] Acyl dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.520523 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACTGCTG CGACCGAAAT CACTCAGGAG CTCGCCAAGG CGACGCTTAG CGAAGAAATG
CTCCAGAACA TGCGCAACCT GATCGGGACA GATCTGCGCA CCGATCATTG CGTGAACAAC
GAGTACGCAA CGCGTCACGC GATTACGCGC TTTTGTGAAG GGATAGGCGA CGACAACCCG
CTTTGGACGG ATCGCGATTA TGCGGGTGAA AGCCCGTATG GAGGCCTGAT TGCGCCGCCC
AGCTTCATCT TCGCGTGCCT TGCTTCGATC CAGGTGGGCT GGCCGGGTCT GGGCGGGTTC
CATGCGGAAA CCAAGCTGGA CTTCTACAAG CCGATCCGCG AGGGTGACCG CATCCTTGCC
AAGGTGACCT TTGACGGTTT CGACGGACCC AAGGACAGCG CATTCGGTGG TCGCAGCATC
AAGGATTATC TGCGTCAGGA ATACTTCAAC CAGGATGACG AACTGGTCGC GCGCTTCATC
TGTTCGCGTA TGCGCTTCGA GCGTGGTGAG ATGCAGAAGC GCCGCGAGAG CCGCAAGATC
GAGCTGCCCC ATCCGTGGAC GCCCGAGCAA CTGGAGCAGA TCGAGAACGA CATCCTTTCA
GAGGAGATCC GCGGCTCGGT CCCGCGCTAT TGGGAGGACG TGAATGTCGG CGATGAGATG
GGTTCGCTTA CCAAGGGGCC CATCGGACTG ACGGACGAAG TCGCCTTCGT CGCCTCCGGT
GCCGCGCCGA TCCCGCGGAT CTGTGCCCAC AAAGTCGCGC TGAAGCGCTA TCGCAAGCAT
CCCAAATGGG CATTCCGCGA TCCGTCTACC CATGCTCTCG AGCCGGTTTA CTCGGTCCAC
TACAACGACT ATGCCGCCCG ACTTCAGGGG GCGCAGGCGG CCTATGACGT CGGTATCCAG
CGAACCTGCT GGCAGATCCA CTCGTTGACG AACTGGATGG GCGACGCCGG GCGGCTGAAG
GTGGCCAACT CGCAATATCG CGCGCATGTC TACCTGTCCG ATGTTCTAAG GCTGGGCGGC
CGGGTCACCG CTAAGGAGAT CGATGCGGAC GGTGATCATG TGGTGCGGAT CGAAACCTGG
GCGATGAACC AGCGCGATCA GAACTGCATG CCTGGCGAAG CTGTGGTCGC GCTTCCCACC
AAAGGGTGA
|
|---|
| Protein sequence | MTAATEITQE LAKATLSEEM LQNMRNLIGT DLRTDHCVNN EYATRHAITR FCEGIGDDNP
LWTDRDYAGE SPYGGLIAPP SFIFACLASI QVGWPGLGGF HAETKLDFYK PIREGDRILA
KVTFDGFDGP KDSAFGGRSI KDYLRQEYFN QDDELVARFI CSRMRFERGE MQKRRESRKI
ELPHPWTPEQ LEQIENDILS EEIRGSVPRY WEDVNVGDEM GSLTKGPIGL TDEVAFVASG
AAPIPRICAH KVALKRYRKH PKWAFRDPST HALEPVYSVH YNDYAARLQG AQAAYDVGIQ
RTCWQIHSLT NWMGDAGRLK VANSQYRAHV YLSDVLRLGG RVTAKEIDAD GDHVVRIETW
AMNQRDQNCM PGEAVVALPT KG
|
|---|
| |