Gene Pden_3228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3228 
Symbol 
ID4581792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp393111 
End bp394610 
Gene Length1500 bp 
Protein Length499 aa 
Translation table11 
GC content63% 
IMG OID639770552 
Productaldehyde dehydrogenase 
Protein accessionYP_917005 
Protein GI119385950 
COG category[C] Energy production and conversion 
COG ID[COG1012] NAD-dependent aldehyde dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.97946 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCCA ATCTGAACTC GATTCGTGCG AAGCTGGAAA TCCGCCCCGG CCGCCTTTTC 
ATCGGCGGCC AGTGGCTGGA TTGGGACGGG GCTCGCTTCG ATCAGATCAA TCCCAATGAT
AACCAGATCA TTGGCACCTT CGCCGAGGCC GGACAACGTG GCGTGGATCT CGCTGTCGCC
GCCGCCCGCC ATGCATTTGA TGACGGCCCT TGGCCTACCC TGCCCGCGCA GGACCGCAAG
CGCATCCTCC AACCCATCAT CGAGCGGATC TATGAACTTG AAGCCGAGCT TGCCACGCTC
CAGACGCTCG ACAACGGGAT GCCCTACAGC TTCAGCCGCC ATTCGCGCGC CTCGGGCAAG
TCCTGCGCCG ACATCCTGGA CCATCATGCG GGCTGGTGTG ACAAGATCAC CGGCGAGACG
TTTCCGCGCC ATTCATCCAG TTCGAACCTG CAATATCTGA CCTACCGCGA TCCGGTCGGC
GTCGTGGGCG CGATCCTTGC GTGGAACGTG CCCCTGAACA TGTTTGCAAT CAAGGTGGGA
CCGGCCCTTG CAAGCGGCTG CACCGTCGTG CTGAAGCCGT CGGAATACAC CAACCTCGCG
GTGACCCGGC TGGTCGAGAT CTTTGCCGAA AGCGATCTGC CGCCCGGAGT CGTCAACTTC
GTCACCGGCG GGGCCGAGAC CGGGGCCGCG CTTGCAGGCC ATCCAGGCGT TGACAAGGTG
ACATTTACCG GCAGCGCGGC AGTGGGTGAG CGGATCGTCT CCGTCAGCGG CGCCAACATG
AAGCGGCTGT CTTTGGAACT GGGAGGCAAA AGCGCGGGCA TCGTGTTCCC GGAGGCGCGC
AGCGTGGCGA GCGCCGCCAC CACCATGATG GGTCTTTGCT CGACCTTCCT GTCGGGCCAG
GTCTGCACCA CGCCAAGCCG TGCGCTGGTG CATCGTTCGA TCTTTGATGA ATTCGTCCAT
CATGCCAGCG AGCAGGTGAA GCAGGTCCGC TTCGGCGACC CATTCGATCC CGCCACGACA
TCTGCGCCAA TCATCTCTCG CGCGCAGGTC GAACGCATCC GCAACCTAAT CGATAGCGGG
ATCGAACAGG GCGCTCGCCT GGCTTTCGGG GGCGAGGAGT GCGACGACAT CCCCGGAGGC
GGCAACTGGA TCGCCCCGGC CCTATTTCTC GATGTCGATC CCGGAATGCG CATCGCGCGC
GAAGAATTCT TCGGGCCGGT CTTGTGCGCC ATCCCCTTCG ACAGCGAGGA GGAGGCAATC
CGTCTGGCCA ATGACAGCGA ATATGGCTTG GCTGGCTGCA TCTTCACCAC TGACATTGCC
CAAGGGATGC GCGTCGCCCG CTCGATTCGC ACTGGCGCGA TTGGCATCAA TGGCTATGCC
AGCGTCGCCA ATGCCCCGAT GGGTGGGGTC AAGCGCTCCG GCCTGGGCCG CGAAGGTGGC
TGGGCCTCGA TCGATGCGTT CACCGAAATC AAGACCGTGG CCATCAACCT CGATGGTTGA
 
Protein sequence
MNANLNSIRA KLEIRPGRLF IGGQWLDWDG ARFDQINPND NQIIGTFAEA GQRGVDLAVA 
AARHAFDDGP WPTLPAQDRK RILQPIIERI YELEAELATL QTLDNGMPYS FSRHSRASGK
SCADILDHHA GWCDKITGET FPRHSSSSNL QYLTYRDPVG VVGAILAWNV PLNMFAIKVG
PALASGCTVV LKPSEYTNLA VTRLVEIFAE SDLPPGVVNF VTGGAETGAA LAGHPGVDKV
TFTGSAAVGE RIVSVSGANM KRLSLELGGK SAGIVFPEAR SVASAATTMM GLCSTFLSGQ
VCTTPSRALV HRSIFDEFVH HASEQVKQVR FGDPFDPATT SAPIISRAQV ERIRNLIDSG
IEQGARLAFG GEECDDIPGG GNWIAPALFL DVDPGMRIAR EEFFGPVLCA IPFDSEEEAI
RLANDSEYGL AGCIFTTDIA QGMRVARSIR TGAIGINGYA SVANAPMGGV KRSGLGREGG
WASIDAFTEI KTVAINLDG