Gene Pden_3175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3175 
Symbol 
ID4581739 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp344690 
End bp345589 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content65% 
IMG OID639770499 
Producthypothetical protein 
Protein accessionYP_916952 
Protein GI119385897 
COG category[R] General function prediction only 
COG ID[COG5006] Predicted permease, DMT superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAATA CGCCAGATTT GCTACGACTG ATCGCGACAG TCTTCATCGC GGTGACCTGC 
GTGGTCATCG GGGATACGGC GGGCAAGCTG CTGACCGGCG GCGGCGTGGA TCCCTTCATC
GTGGCATGGT CGCGGTTCTT CCTGGCCGCG CTGATGCTGC TTCCCTTCAG CGGCTTGACC
CGGCGGGAAC TGCCGGCATT GCTGGACTGG CGCGTCCTGC TGAGGGCCGG GCTTATCGCC
AGCGGCATAT GCTGCATCCT GACCGCCCTG AAGACAGAAC CGATCGCCAA TGTCTTCGGC
GCCTTCTTCG TCGGCCCGGT CGTGTCCTAT GTCCTGGCGA TCCTGTTTCT GGGCGAGCGG
CCATCGGCGC CAAGAAGCCT GCTACTGGGG CTCGGCTTCG CGGGCGTGAT GCTGGTGGTC
AAGCCTGGTT TCGGCAGTTC CGCCGGCATG GGTTTCGCCC TGGCGGCGGG AACATTCTAC
GGCGCCTATC TGGTCATGAC CCGCACCCTG GCGGGAAGAT TCCGGCCGCG ATTCCTGCTG
ATCTCGCAAT TGCTGATCGG GGCCGTCGTC CTGACGCCCT TCGGGTTGCA AGCCGATTTT
CCCGTGCCGG ACGTGCCCTT GCTGGTGCTG CTTCTGATCA GCGCCGTCGG TTCGGCCGTG
GGCAACTTCC TGCTGGTCAT GGCCAGCAGG ACGGCCGAGG CCAGCCTGAT CGCGCCCCTG
GTCTACAGCC AGTTGATTTC GGCCACGGCG CTGGGGATCG TCGTCTTCGG CGAATGGCCC
GATCTCGTAT CACTGGCGGG GCTGGTGTTG ATCGCGATCT CGGGGCTGGG CTCGCTGCTG
GTTCACCAGC GTGCGGGCAG GGGGCGCCTA TCGACCCCGC CTTGCCCGCG CACGCTGTGA
 
Protein sequence
MTNTPDLLRL IATVFIAVTC VVIGDTAGKL LTGGGVDPFI VAWSRFFLAA LMLLPFSGLT 
RRELPALLDW RVLLRAGLIA SGICCILTAL KTEPIANVFG AFFVGPVVSY VLAILFLGER
PSAPRSLLLG LGFAGVMLVV KPGFGSSAGM GFALAAGTFY GAYLVMTRTL AGRFRPRFLL
ISQLLIGAVV LTPFGLQADF PVPDVPLLVL LLISAVGSAV GNFLLVMASR TAEASLIAPL
VYSQLISATA LGIVVFGEWP DLVSLAGLVL IAISGLGSLL VHQRAGRGRL STPPCPRTL