Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_3166 |
Symbol | |
ID | 4581730 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | + |
Start bp | 339330 |
End bp | 340253 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639770490 |
Product | hypothetical protein |
Protein accession | YP_916943 |
Protein GI | 119385888 |
COG category | [R] General function prediction only |
COG ID | [COG0730] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.287398 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.58484 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAACGG CGCGAATGGC GCGGCGTGAT CCGGACGGGG GGAGACCACC CTATCGGAGC CCGGCCGGAT CACGCCGGAG GCGGGAAAGG CAGAACGGCG TTCAAACTCC GTCAGCTGTC CTTGGTTATG GCGCATTGGC GGGGCATAAG CTGGGCCTCA AACAGTTGGG GACCGGCATA TTGAATATCG ACACGGGTCC GCTTGCGGCT CCCTTCCTCG TCATCGCTCT GATCTATGCG GCGGTCGGTC AGGCCGGGGC ATCGGGTTAC ATTGCCGTAA TGGGTCTGGC AGGTTTTGCG CCCCTTGCCA TGAAGACGAC GGCGTTGTCG CTGAATCTGA TGGTTGCGGC CATCGGCACA GTTCTGTTCC TGAAGGCCGG GCGTCTTTCG TGGCGGAATG TCTGGCCTTT CGCCATTCTC GGCTTTCCCT TCTCGATGCT TGGCGGAGCG GTCCAGTTGC CGGAAAGCGT CTATTTCCCG GTCGTCGGGA TCGTGTTGAT CCTTTCCGCG CTTCAGATGA TGCGCACGGC GTTTCACGGC AGGCCGTCGG CCTCCGGAAC CGTAGTCACA CCACCCTTCG GCGCGGCTTT GGCGACCGGG GCCGTCATCG GCTTCGTGTC CGGGACGACC GGAACAGGTG GCGGTGTGTT CCTGGCCCCG ATCATCCTCA GCATGAACTG GGGCACGGCC CGGCAGACGG CCGCCACTAC GGCGGTCTAT AACCTGATGA ACTCGGCTGC GGCGCTGGTC GGGGCCTATG CGGCATGGGA TCATATCCCG GCCGCCCTGC CGATCTGGCT TGCCGCCGTT GCCATCGGTG GTTCGGTCGG CGCCTGGATC GGCAGCCGTT ACCTGTCCGA CCGCTGGCTG CGCGGAATCC TTGCGTTCCT GCTGCTGGTT TCAGGCATCA AGCTCATCTG GTAG
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Protein sequence | MRTARMARRD PDGGRPPYRS PAGSRRRRER QNGVQTPSAV LGYGALAGHK LGLKQLGTGI LNIDTGPLAA PFLVIALIYA AVGQAGASGY IAVMGLAGFA PLAMKTTALS LNLMVAAIGT VLFLKAGRLS WRNVWPFAIL GFPFSMLGGA VQLPESVYFP VVGIVLILSA LQMMRTAFHG RPSASGTVVT PPFGAALATG AVIGFVSGTT GTGGGVFLAP IILSMNWGTA RQTAATTAVY NLMNSAAALV GAYAAWDHIP AALPIWLAAV AIGGSVGAWI GSRYLSDRWL RGILAFLLLV SGIKLIW
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