Gene Pden_3166 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3166 
Symbol 
ID4581730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp339330 
End bp340253 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content64% 
IMG OID639770490 
Producthypothetical protein 
Protein accessionYP_916943 
Protein GI119385888 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.287398 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.58484 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAACGG CGCGAATGGC GCGGCGTGAT CCGGACGGGG GGAGACCACC CTATCGGAGC 
CCGGCCGGAT CACGCCGGAG GCGGGAAAGG CAGAACGGCG TTCAAACTCC GTCAGCTGTC
CTTGGTTATG GCGCATTGGC GGGGCATAAG CTGGGCCTCA AACAGTTGGG GACCGGCATA
TTGAATATCG ACACGGGTCC GCTTGCGGCT CCCTTCCTCG TCATCGCTCT GATCTATGCG
GCGGTCGGTC AGGCCGGGGC ATCGGGTTAC ATTGCCGTAA TGGGTCTGGC AGGTTTTGCG
CCCCTTGCCA TGAAGACGAC GGCGTTGTCG CTGAATCTGA TGGTTGCGGC CATCGGCACA
GTTCTGTTCC TGAAGGCCGG GCGTCTTTCG TGGCGGAATG TCTGGCCTTT CGCCATTCTC
GGCTTTCCCT TCTCGATGCT TGGCGGAGCG GTCCAGTTGC CGGAAAGCGT CTATTTCCCG
GTCGTCGGGA TCGTGTTGAT CCTTTCCGCG CTTCAGATGA TGCGCACGGC GTTTCACGGC
AGGCCGTCGG CCTCCGGAAC CGTAGTCACA CCACCCTTCG GCGCGGCTTT GGCGACCGGG
GCCGTCATCG GCTTCGTGTC CGGGACGACC GGAACAGGTG GCGGTGTGTT CCTGGCCCCG
ATCATCCTCA GCATGAACTG GGGCACGGCC CGGCAGACGG CCGCCACTAC GGCGGTCTAT
AACCTGATGA ACTCGGCTGC GGCGCTGGTC GGGGCCTATG CGGCATGGGA TCATATCCCG
GCCGCCCTGC CGATCTGGCT TGCCGCCGTT GCCATCGGTG GTTCGGTCGG CGCCTGGATC
GGCAGCCGTT ACCTGTCCGA CCGCTGGCTG CGCGGAATCC TTGCGTTCCT GCTGCTGGTT
TCAGGCATCA AGCTCATCTG GTAG
 
Protein sequence
MRTARMARRD PDGGRPPYRS PAGSRRRRER QNGVQTPSAV LGYGALAGHK LGLKQLGTGI 
LNIDTGPLAA PFLVIALIYA AVGQAGASGY IAVMGLAGFA PLAMKTTALS LNLMVAAIGT
VLFLKAGRLS WRNVWPFAIL GFPFSMLGGA VQLPESVYFP VVGIVLILSA LQMMRTAFHG
RPSASGTVVT PPFGAALATG AVIGFVSGTT GTGGGVFLAP IILSMNWGTA RQTAATTAVY
NLMNSAAALV GAYAAWDHIP AALPIWLAAV AIGGSVGAWI GSRYLSDRWL RGILAFLLLV
SGIKLIW