Gene Pden_3153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3153 
Symbol 
ID4581717 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp330661 
End bp331068 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content66% 
IMG OID639770477 
Productcupin 2 domain-containing protein 
Protein accessionYP_916930 
Protein GI119385875 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACG AACACGCGGG CAAGAGTGTT CTGCACCTGC CGCCAGGTGC GGGACGGTGC 
TATGAACTCG GCCGGATGAC GGCGGTGTTC AAGGCCGATG AGGATGAGAC GGCTGCCCGC
TGCAGCGTCT CGGAATGGTG GCTGGAGCCT GGCGCCGACG GGCCGGGCGC GCATGCGCAT
GAAGTGAATG ACGAGATCTT CTACGTCATC GCCGGCACCG TCAGCTTCCT TGCCGGGGAG
GACTGGCTGG ACGCGCCGCA AGGGACGTTC CTGCGCATCC CGGCCGGCGT GACCCATGAT
TTCAGGAACC GTACCGCCGA GCGTGTCGGT CTGCTGAACG TCTTCATCCC CGGCGGGTTC
GAGCGCGACA TGCCCGCCAT CGCCGACTGG TTCAGGGACA ATCCCTAG
 
Protein sequence
MSDEHAGKSV LHLPPGAGRC YELGRMTAVF KADEDETAAR CSVSEWWLEP GADGPGAHAH 
EVNDEIFYVI AGTVSFLAGE DWLDAPQGTF LRIPAGVTHD FRNRTAERVG LLNVFIPGGF
ERDMPAIADW FRDNP