Gene Pden_3149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3149 
Symbol 
ID4581713 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp326590 
End bp327381 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content69% 
IMG OID639770473 
Productphytanoyl-CoA dioxygenase 
Protein accessionYP_916926 
Protein GI119385871 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.534046 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGACCA ATCCCGAACC CACCGGCCTG ACCGAGCGTC AGGTCCAGAG CTTCATCGAG 
GACGGCTTCG TCAGGATCGA CGGCGCCTTC CCCACCGACC TCGCCCGGCA ATGCCGGGAC
GAGTTGTGGG CAGCTGCGGG CCTCTCGCCC GACCGGCCCG AGGGCTGGAC GCGACCCGTC
ATCCGGATCG CAGCGATGTC CACGCCCGCC TTCGTCCAGG CCGCCAACAC CCCGCTGCTG
CGCCGGGCCT ATGACCGGCT TGCCGGGCCG GGGCGCTGGC TTGCGCCGCA AGGGCTGGGC
AGTTTCCCGA TCCGCTTCCC CTCGCCCATC GCCCCCGGCG ACGATGGCTG GCATGTGGAC
ATGAGCTTCG GCGACAGCCC GGATTTCATG GAGTGGCGGG TCAATGTCAA AAGCAGTGGC
CGCGCGTTGC TGATGCTGTT CCTGTTCTCG GATGTCGGGC CCGGCGATGC ACCGACCCGG
ATCAGGCGGG GCTCGCACGC CACCATTGCC CGAGAGTTGC TGCCCCATGG GGCGGCAGGC
GCGACACTGC GGCAATTGTC GGCGAACGGC TATGCCTCGA CCGAGACCTG CCCCGAGGTG
CTGGCGACCG GCGCGGCGGG CACGGTCTAT CTGTGCCATC CGTTCCTGGT CCATGCCGCA
CAGCCGCACC GGGGAACAAG ACCCCGTTTC ATGGCCCAGC CGCCCTTGCT GCCCAAGGGC
GAGTTCGACC CGGCCTTGCC GCCCTCGCCG GTCCAACTCG CCATCCGCAG GGCCTGCGGG
CTGGCGTTCT GA
 
Protein sequence
MMTNPEPTGL TERQVQSFIE DGFVRIDGAF PTDLARQCRD ELWAAAGLSP DRPEGWTRPV 
IRIAAMSTPA FVQAANTPLL RRAYDRLAGP GRWLAPQGLG SFPIRFPSPI APGDDGWHVD
MSFGDSPDFM EWRVNVKSSG RALLMLFLFS DVGPGDAPTR IRRGSHATIA RELLPHGAAG
ATLRQLSANG YASTETCPEV LATGAAGTVY LCHPFLVHAA QPHRGTRPRF MAQPPLLPKG
EFDPALPPSP VQLAIRRACG LAF