| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3122 |
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| Symbol | |
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| ID | 4581686 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | - |
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| Start bp | 305322 |
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| End bp | 306503 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639770446 |
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| Product | phage integrase family protein |
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| Protein accession | YP_916899 |
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| Protein GI | 119385844 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAAGA TCACGAAACG ATCCGTCGAC GCGGCGGCGC CGGCCGAGCA GGAGTTCTTC
CTCTGGGACG AAGAGTTGAA GGGCTTCGGA TTGCGCGTCT ATCCATCGGG GCGAAAGATG
TATCTGGCCC AGTACCGTGC CGGCGGCCGG TCGCGCCGTG TCAACATCGG GCTGCATGGT
GCGATGACAC CGGAAATGGC CCGCACCGAG GCGATGAAGT ATCTGTCGGA TGTGCGGCTC
GGGGCCGATC CCGCCGGTGA GCGCGACCGC CGGAAGGCAT CCCCGACCAT CAAAGAGTTC
AGCAAACGCT TCCTTTCGGA TCACGTCGCG CTGCATTGTA AAGCCTCGAC CTATGGCGAG
TACGAGCGAT CCATAGATCT GTTCATCAAT CCGAGGTTCG GCAGTCATCG CATCATCGAC
ATCACCCGGG CCGACGTCGT CGGACTGCAC CAGTCGATGC GACATATCCC CTATCAGGCG
AACCGGACCC TCGGCGTCCT CTCGGTGATG TTCACCGTGG CCCATGCCTG GGGCGTGCGC
ACCGACGGAG TGAACCCCTG CTGGAAGGTG AAGCGATACC GGGAGGAAAA GCGCGAGCGC
TATCTCACCC CGGACGAGTT GGCACGGCTT GGCAAGGTGC TGGACTGTGC AACGGAGGAG
CCCGAAGCGG CCAATTGTAT CCGCTTGCTT CTTCTGACCG GATGCCGCCT CAGCGAGATT
CAGACCCTGA AATGGCGCTA TGTCGATTAC CGCAACGGTC TTCTCCGCCT GCCGGATTCC
AAGACCGGCG CCAAGCTGGT CCCGATCGGC AAGGCGGCCA TCAAGGTCCT GAAAACCATC
CCGAAGATCG ACGGAAACCC CTATGTCATC ACCGGCCGGA TGGAGGGTCA GCACCTGACC
GACATGCAGA AGCCGTGGCG GCGGTTGCGC AAGCGCGCCG GGCTGGACGA TCTTCGTATC
CATGATCTAC GCCATTCCTT CGCCTCGGAT GCGCTGCAGC TCGGGCAGGA CCTGACGATG
ATCGGACGGC TCCTCGGCCA TACGCAGGTT CAGACCACGG CGCGTTATGC GCATCTCAAG
ACCGATCCGG TCCGCTCGGC GGCGGACGCC GTCTCCGACG CTGTGGCGCA GGCACTGGCG
CAACCGGTCA CCGAGGACGG TGATGAAATT GCCGCAGCAT GA
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| Protein sequence | MTKITKRSVD AAAPAEQEFF LWDEELKGFG LRVYPSGRKM YLAQYRAGGR SRRVNIGLHG
AMTPEMARTE AMKYLSDVRL GADPAGERDR RKASPTIKEF SKRFLSDHVA LHCKASTYGE
YERSIDLFIN PRFGSHRIID ITRADVVGLH QSMRHIPYQA NRTLGVLSVM FTVAHAWGVR
TDGVNPCWKV KRYREEKRER YLTPDELARL GKVLDCATEE PEAANCIRLL LLTGCRLSEI
QTLKWRYVDY RNGLLRLPDS KTGAKLVPIG KAAIKVLKTI PKIDGNPYVI TGRMEGQHLT
DMQKPWRRLR KRAGLDDLRI HDLRHSFASD ALQLGQDLTM IGRLLGHTQV QTTARYAHLK
TDPVRSAADA VSDAVAQALA QPVTEDGDEI AAA
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