| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3116 |
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| Symbol | |
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| ID | 4581680 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | - |
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| Start bp | 300689 |
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| End bp | 301594 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639770440 |
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| Product | helix-turn-helix domain-containing protein |
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| Protein accession | YP_916893 |
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| Protein GI | 119385838 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGATC CACTTGCTCA GGTCATCGAA CTTTTGCGCC CGCAGGCGGT GTTCTCGAAG
GGGATCACCG CCGCAGGCCA CTGGGCGGTT GAATATACCG AATTCGGCCG CCCGGCCTTT
GCGGCGATGA CGATGGGCCG TTGCCGGTTG TCCGTCGAGG GCGAAGAGCC GGTCACCGTC
GAGGCCGGCG ATTTTGTGCT GCTGCCCGCC ACGCCGCGTT TCGGCATGTC CAGCCTGAAC
CCCGGCCCGC TGCGCCGGAT CGACGCCCGG ACCGACCCGG CGAAGCACGA GGTTCGCCAC
GGCCGGCAGG ACGGCCCGCC CGAAATGCGG CAGTTCGGCG GCTGGTTCAC CTTTGCGGCG
CCGGACGCGG CGCTGCTGGT GACCCTGCTA CCCCGGATGA TCCATCTGCG CGGCGTGCCC
CGCCTGACGC AGTTGGTTCA TATGCTGGGC GAGGAGGCTG CGCGCGACGA TGCGGGCCGC
GACCTGATTC TGGCGCGTCT GGTCGAGATC CTGCTGATCG AGGCGCTGCG CGCCGCGCCG
GAAGGAGCCG CGGCACCCGG CCTGCTGCGC GGCCTTTCCG ATCCGCGCAT CGCCAGCGCC
CTGCGCAGCC TGCATGGCGA CATCACCCGC ACGTGGACGG TTCCCGACCT GGCCGAAACG
GCCGGCATGT CGCGCTCGGC CTTCTTCGAG CGGTTCACCC GCCTGGTCGG CCGCCGGCCG
ATGGAATACC TGACCATCTG GCGCATGGCG GTGGCGCGCG ATCTCTTGCG GCGCGGCAGC
CTTGCGCTGG AGGAGGTCGC GGCGAGGGTG GGCTATGGTT CCGCCAGCAC CTTCAGCACC
GCTTTCAGCC GCCACACCGG CCAACCGCCG GGGCGGTATG CAAAAGCCGT GCTGGCGGAG
GGATGA
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| Protein sequence | MSDPLAQVIE LLRPQAVFSK GITAAGHWAV EYTEFGRPAF AAMTMGRCRL SVEGEEPVTV
EAGDFVLLPA TPRFGMSSLN PGPLRRIDAR TDPAKHEVRH GRQDGPPEMR QFGGWFTFAA
PDAALLVTLL PRMIHLRGVP RLTQLVHMLG EEAARDDAGR DLILARLVEI LLIEALRAAP
EGAAAPGLLR GLSDPRIASA LRSLHGDITR TWTVPDLAET AGMSRSAFFE RFTRLVGRRP
MEYLTIWRMA VARDLLRRGS LALEEVAARV GYGSASTFST AFSRHTGQPP GRYAKAVLAE
G
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