Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_3105 |
Symbol | |
ID | 4581669 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | + |
Start bp | 289881 |
End bp | 290732 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639770429 |
Product | rubredoxin-type Fe(Cys)4 protein |
Protein accession | YP_916882 |
Protein GI | 119385827 |
COG category | [C] Energy production and conversion |
COG ID | [COG1773] Rubredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.937161 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGTCG AGACCGCACG GGGCGGGTTC GAGGGGTCTT ATCTGGGCGC CAATGACCGG ATCAGCCCGC AGGCGATCAT GGAATGCAAG ATCTGCTGGA CCAGCTATGA CCCGGCCGAG GGGGATGAAT ACCGGCAGGT TCTGCCCGGC ACGCCGTTCG CGGCCTTGCC CGCCGACTGG AAATGTCCCG GCTGCGACGC GCCGAAGCAA CAGTTCATCG TGCGCGAGGA TCCCGGCTCT GACGAGATGC GGATCGCGGC CGAGATCGAG CGGCGCTGCG CCCGGCTGGT CGCCGACTTC CGCGAGGTCT TCAACGCAAA GATGCGCGAC GTGCCGATCA TCAATCAGGC GCTGCATGTC GAGGCGATGG CCTTTCGTCC CTGGCAGGGC GGCTTTCTGG GGGTGCTGAT CGCGCCCTGG TTCATGAACC TGATCTGGCT GCCGGGCGAG GATCAGGACT GGTCGGCCCT GAAGGCGGGC GAGAAAGAGG TGGTCGCCTT TCCCTCGGGC GAATATGAAT TCATCCATAA CAGCCGCGAG ATGACCGGCC CTTACAAGGC CTGTTCGCTG TTCTCGCCGA TGGCGGATTT CACCAGCCAG TTGCAGGCCG TCGAGGTCGC GCGCGCGGTG ATGGTCGAGC TGTTCAAACC CGAAAACCGC GACGGGACCG ACCGCGCCGC CGAGATTCGC GCCGCCCGCG AGGCCGAGCT TGCACCGCCG TCCGAGGCCG GACCGGCATC GGATGCACCG ATCCCCAATC CGCGCCCCAC GCGCCGGGCG CTGCTGACCG GCGGGCTGGC CGCTGCTCCG GCAGAGGGCG ACGATCCGGA GATATCCGGG GGCGTGGAAT GA
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Protein sequence | MSVETARGGF EGSYLGANDR ISPQAIMECK ICWTSYDPAE GDEYRQVLPG TPFAALPADW KCPGCDAPKQ QFIVREDPGS DEMRIAAEIE RRCARLVADF REVFNAKMRD VPIINQALHV EAMAFRPWQG GFLGVLIAPW FMNLIWLPGE DQDWSALKAG EKEVVAFPSG EYEFIHNSRE MTGPYKACSL FSPMADFTSQ LQAVEVARAV MVELFKPENR DGTDRAAEIR AAREAELAPP SEAGPASDAP IPNPRPTRRA LLTGGLAAAP AEGDDPEISG GVE
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