| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3095 |
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| Symbol | |
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| ID | 4581659 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 279291 |
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| End bp | 280724 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639770419 |
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| Product | nickel-dependent hydrogenase, large subunit |
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| Protein accession | YP_916872 |
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| Protein GI | 119385817 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0374] Ni,Fe-hydrogenase I large subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGCAGG GGCAGTTGAT CGTCGGTCCG TTCAACCGGG TCGAGGGCGA TCTGGAGATC
CGGCTGGACA TCGCAGAGGG GCGGGTCAGC GCGGCGCGGA TCAACTCGCC GCTTTATCGC
GGGTTCGAGC GTATGCTGCC TGGCAAGGAT CCGCGCGACG CGCTGACCAT CGTGCCGCGG
ATTTGCGGTA TCTGCTCGAT CAGCCAGTCG GCGGCGGCGG CGCGGGCTCT GGCCATGGCA
GTGGGCGAGG TCCCCGAACC GCAAGGAGAG CGGATGGCTG CGCTGATCCA CGCGGTCGAG
AATGTCTCGG ACCATCTGAC GCATTTCAAC CTGTTCTTCA TGCCTGATTT CACCAGACCC
CAATATCAGG CGCGGGGCTG GTATGATCGG GCGGTGGCCC GGTTCACGGC GATGGAGGGA
TCGGCCCTGA AACGCGCGGT CGAGGCGCGG GCGGGGTTGA TGCATGTCCT TGGGCTGATG
GCCGGGAAAT GGCCGCATAC CCTGGCGATC CAGCCCGGTG GTGTCACGCG CGCCCCGTCC
GAACGCGACC GGCTGCGTAT TCTGGCCAGC CTGACGGCCT TTCGCCGCTA TCTGGAAGAT
ACGGTCTTCG GGGCAGCGGT CGAGGATTTC GCGGCCCTTT CCTCGGTCCC GGCGCTGATG
GGATGGCAAG GGGGCGATGC CGGCCTGTTC CTGCGCATCG CCGCCGATCT GAATCTGGCG
GATCTGGGGT GCGGCTCGGG GCGCTATCTG TCCTTTGGCG CCTATCCGCT GGAGGGTGGC
CACGGCTTTG CCCCCGGCAT CTGGGATGGC GGGGCGCAGC CTCTCGACAT CGCGGCGATC
AGCGAGGATT TGTCGCATAG CTGGATGCTG GGGCCTGCGG CTCATCCGGC CCAGGGCGTG
ACCGATCCCG ACGAGGATAT GCGCGACACC GCCTATAGCT GGTGCAAGGC CCCCAGACTG
GCCGGGCGCA CCATGGAAAC CGGCGCGCTG GCCCGGCAGG TGATCGACGG CCATCCGCTG
GCGCTGGATC TGGTCCGCGA TGGCGGCGGC GGGGTGCTGG CGCGGGTGGC GGGGCGTTTG
CTGGAACTGG CGCGCAGTCA GGTTCTGATG GAGGATCTGG CGCGCGGGAT CGTGCCCGAG
GCCCGCTTCA TGGCCGGCCC CCTGAAAATC AGCGACGGGA TCGGCGAAGG GCTGGTCGAG
GCCGCGCGCG GCGCGCTTGG CCATTGGCTG AGGATCGAAG GCGGGCGGAT CGCCTCGTAT
CAGATCGTCG CTCCGACCAC CTGGAACTTC AGCCCGCGCG ACGCCGGCGG CGTGCCCGGC
CCGGTCGAGG CGGCGCTTGA GGGGCTTGTG GTGCAGCCGG GCGAGACGAC CCCGCTCAGC
GTGCAGCATG TGGTGCGCAG CTTTGATCCG TGCATGGTGT GCACCGTGCA TTGA
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| Protein sequence | MGQGQLIVGP FNRVEGDLEI RLDIAEGRVS AARINSPLYR GFERMLPGKD PRDALTIVPR
ICGICSISQS AAAARALAMA VGEVPEPQGE RMAALIHAVE NVSDHLTHFN LFFMPDFTRP
QYQARGWYDR AVARFTAMEG SALKRAVEAR AGLMHVLGLM AGKWPHTLAI QPGGVTRAPS
ERDRLRILAS LTAFRRYLED TVFGAAVEDF AALSSVPALM GWQGGDAGLF LRIAADLNLA
DLGCGSGRYL SFGAYPLEGG HGFAPGIWDG GAQPLDIAAI SEDLSHSWML GPAAHPAQGV
TDPDEDMRDT AYSWCKAPRL AGRTMETGAL ARQVIDGHPL ALDLVRDGGG GVLARVAGRL
LELARSQVLM EDLARGIVPE ARFMAGPLKI SDGIGEGLVE AARGALGHWL RIEGGRIASY
QIVAPTTWNF SPRDAGGVPG PVEAALEGLV VQPGETTPLS VQHVVRSFDP CMVCTVH
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