| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3059 |
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| Symbol | |
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| ID | 4581623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 238652 |
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| End bp | 240073 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639770383 |
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| Product | amidase |
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| Protein accession | YP_916836 |
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| Protein GI | 119385781 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.477089 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.441598 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGCGC TGAAGCCCGT GACCATGACA GAGCAGCTCC GCCAGCTGCG CAGCGGTGAG
ACGACTGCAG AGGCCATGAT GACCCGCGCG ATCCGGCGGG CCGGAGATTT AGGTCATCTC
AATGCCTTTT TGACCGTTGA GCCTGACCTG GCGCTGCAAC AAGCCCGAGC CGTCGATAGG
GCGAGAACAG AGGGGGCGCA GATGCCAATA CTGGCGGGAC TTCCGATCGG TGTGAAGGAT
AACATCGATG TCGAAGGATG GGTCACTAGC GGTGCCACAC CCGCATTGGC CCAGCTGCGT
GCAAAGGCGA CGGCGCCGGT TTTGCAGAAG CTGCTTCAGT CTCAGGCAGT TCTGCTAGGT
AAAACCAATC TGCACGAACT GGCTTTCGGA GTCACGAATA CCAACTTTAC CCCTATACCG
GCGGTCCGAA ATCCGCATGA TCCGGCCCGG ATTAGCGGGG GTTCCTCGGG TGGTACAGCT
GCCGCTATTG CGGCGGGTAT TGTCTCTGCC GGGCTTGGAA CAGATACCTC TGGTTCTGTT
CGCATACCTG CCGCGCTTTG CGGTATCGCG GGCCTTCGGC CATCGGTCGG CGCGGGAGGC
ACTGAACGCA GATATTCCTC GCAGGGGGTT CTGCCAATCA GTCACACCAA CGATACGCCC
GGCCCGATGG CGGTGTCTGT CGAAGATTTG GCGCTTCTGG ACGCTGTAAT AACTGGAACT
GATCCGGTCA CTGCCAAATC GCTCAAAGGC GTGCGCTTGG GCGTCCCCGA TTGTTTCTGG
ATCGACCTTG ATCCTGATGT TGAACGTGTC TGCCGTGAGC TATGTGGCAA GCTCGCGAAG
GCGGGGGCTG AGCTGGTTTC TGTTAGCCTG CCTAGGCTCC GTGATGTATG GCGGCAGGTA
TCCGCGCCGG TTGTGCTGCA TGAGCCGCGC GAAGATATTC CCGTTTGGCT CGCTGCAAAT
GGCCGATCAG ACATCTCTAT CATGGATATT TTTCGTCAGA TTGTGAACCC TGATGTGCGA
GCCGCTTTTG AGGTTGTAAC CTCGGAAAGC TCTGACAAAA ATTATCGTGA TGCAATTCAA
AATTATCGTC CTGAGCTGTG CCGGATTTAT GATGGAGCGT TTCAAAAAAA TGGCCTCGCG
GCTTTGATTT TTCCAACGGT TCCAATTCCA GCAACATATA TCGACATCGA AAGCGCGTTC
GGAAAAGTAA AGATAAACGG TGAAGATCGG GAGATTTTTG ATACGCTTGT TCGAAATACT
GATCCGGGTG CTAACGCTGG ATTGCCGGGA TTGAGTATTC CTGTTGGATG GACGCAGAGT
GGTTTGCCGG TTGGAATTGA AATTGACGGG CCGGTTGGTT CGGATCGGGA TGTTCTCGGA
ATTGGAGTTT CAATCGAGCG TGAAATTTCA AATCAAGTGT AA
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| Protein sequence | MSALKPVTMT EQLRQLRSGE TTAEAMMTRA IRRAGDLGHL NAFLTVEPDL ALQQARAVDR
ARTEGAQMPI LAGLPIGVKD NIDVEGWVTS GATPALAQLR AKATAPVLQK LLQSQAVLLG
KTNLHELAFG VTNTNFTPIP AVRNPHDPAR ISGGSSGGTA AAIAAGIVSA GLGTDTSGSV
RIPAALCGIA GLRPSVGAGG TERRYSSQGV LPISHTNDTP GPMAVSVEDL ALLDAVITGT
DPVTAKSLKG VRLGVPDCFW IDLDPDVERV CRELCGKLAK AGAELVSVSL PRLRDVWRQV
SAPVVLHEPR EDIPVWLAAN GRSDISIMDI FRQIVNPDVR AAFEVVTSES SDKNYRDAIQ
NYRPELCRIY DGAFQKNGLA ALIFPTVPIP ATYIDIESAF GKVKINGEDR EIFDTLVRNT
DPGANAGLPG LSIPVGWTQS GLPVGIEIDG PVGSDRDVLG IGVSIEREIS NQV
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