| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3054 |
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| Symbol | |
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| ID | 4581618 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | + |
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| Start bp | 233971 |
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| End bp | 235251 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639770378 |
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| Product | branched-chain amino acid ABC transporter |
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| Protein accession | YP_916831 |
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| Protein GI | 119385776 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.492113 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTAAAG GGTCGGCCTG GCTGGCCGGG GCTGCCGCAG TCTTGTCGGG CGCGAATGCC
GCCCGGGCAG AGGCCTCGGG CGAGCCGGTC CCCATTGGTC AGGCTGCGCC GCTGACCGAT
TTCGCCGCCG CTGACGGCGT GGAATTCCGC AACGGGCTGA TCATGGCCTG CGACGAGATC
AACGCGCTTG GCGGCATTCT TGGCCGCCCG CTGGAGCCGC ATTTCGAAGA CACGAAACAG
ATGGGCGACG CAACCAATGT GCAGGCCGTG CAGCGCCTGA TCGACCGCTA CGGCGTTCAT
GCCGTGATCA ACGGCTATAA TACCGGATCG GGGTCTGCAG TGCAGGACGC TATTGCGGAT
GCCGGCATCA TCTATATGCA CAATGACACC TCCAGTGGGC ATGGGGTGCT GATCGGCTCT
GACCCGGAGC GCTATTTCGG TTCCTTCCAG ACCGATCCGT CGGAAACATG GTATGGCTCG
GGCCTGCTGA AGTTTCTATC CTCCCTGACC GATGGCGGAA CATTCGCGCC CGCCAACCGC
AAACTGGCGA TCATTCTTTC AGCGGGGACC TATTCCTCGA ACATTGCCAA TGTGGTGCGA
GAGGGCGCGG CGGAGCTTGG CTGGGAGGTC AGCCTCTATG AGACTGTAAA TGTGCCGATT
TCGGAATGGG GGCCAACGCT GTCCAAGCTG CGCCAGGACC CGCCCGGCGT GATCGTGGTC
ACGCACTATT TCCCGGCTGA TTTGGCGCAG TTCATGGTTC AGTTCATGAC CAATCCGACG
CCGAGCCTGA TCTATATGCA ATATGGCCCC TCGGTGAAAT CCTTCCGCGA CATCGCCGGA
CCGGCCGCCG CAGGGGTAGT CTTCTCGACC GTGATCGGCG CGCTGCAGGA CGAGATCGGC
CTTGATTTCG AAGCCCGCTA CAAGGCGCGT TTTGGCGATG ACGCGGGGCA TAATTCCGGG
GTCCAGTCCT ATAATGCGGC TTGGATCTGG GCGGCTGCGG CGGCACTCGC CGGTGGCTCC
GGTGCCCCGG GGGAGGAGGA GCAGAACCGC AAAGTGGCCG AACGCATCCG GGCGATGATT
CACCGTGGCC CGAACGGCAC GACACGTTTC ATGCCCGGCG AGCAGGCTGC GGCCTCTTAT
CCGGGCGGCA CGGATGATCC TTCGCTTGGG ATGCCACATC AGTTCCTGCA GATCCAGGAC
CATACTGCAG AGCCGGTCCT GATCGCCCCT TGGCCCTATG CAAAGGCCGG TTTCATCACG
CCGCCCTGGA TCAGGGGGTG A
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| Protein sequence | MLKGSAWLAG AAAVLSGANA ARAEASGEPV PIGQAAPLTD FAAADGVEFR NGLIMACDEI
NALGGILGRP LEPHFEDTKQ MGDATNVQAV QRLIDRYGVH AVINGYNTGS GSAVQDAIAD
AGIIYMHNDT SSGHGVLIGS DPERYFGSFQ TDPSETWYGS GLLKFLSSLT DGGTFAPANR
KLAIILSAGT YSSNIANVVR EGAAELGWEV SLYETVNVPI SEWGPTLSKL RQDPPGVIVV
THYFPADLAQ FMVQFMTNPT PSLIYMQYGP SVKSFRDIAG PAAAGVVFST VIGALQDEIG
LDFEARYKAR FGDDAGHNSG VQSYNAAWIW AAAAALAGGS GAPGEEEQNR KVAERIRAMI
HRGPNGTTRF MPGEQAAASY PGGTDDPSLG MPHQFLQIQD HTAEPVLIAP WPYAKAGFIT
PPWIRG
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