Gene Pden_3048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3048 
Symbol 
ID4581612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp225654 
End bp227174 
Gene Length1521 bp 
Protein Length506 aa 
Translation table11 
GC content68% 
IMG OID639770372 
Producthypothetical protein 
Protein accessionYP_916825 
Protein GI119385770 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCGC AAAACCCTGT TGCGGTGCTG ATCTGTGGCG CCGGTGCGTC GGGTCTTACC 
CTGGCGGTCG ATCTGGCCCG TCGTGGCGTG GCCTTCCGCA TCATCGAGAA GATGGACCAG
CCCTTCGCCG GCTCGCGGGG CAAGGGCATC CAGCCGCGGA CGCAGGAAGT GTTCGCGGAT
CTGGGCGTCC TCGACCGTGT GGTGGCGGCA GGCGGTATCT ACCCGTCGAT GCGGGAATAT
CGCGCGGATG GCACCTGGAT CGAGAAAGAC ATGGCTGAGC GGCATGACCC GACGCCCGCC
GAGCCCTATC AGATCGCGCT GATGGTTCCC CAGTTCCTGA CGGAGCGGGT GCTACGCGAG
CGTCTGGCCG AGCTTGGCCA CCGCGTGGAG TTCGGCACCG AACTCGTCGG GTTCGAGCAG
GACGAGAAGG GCGTCACCGC GCGGCTGGTG GGTCCGGATG GCGAGGAGAC CTTAACCGCC
CGCTATCTCG TCGGCGCCGA TGGTGGCCGC AGCTTCGTGC GGCGCACGCT TGGGGTGGAG
TTCCCCGGCA AGACGCTGGG CGTGCGCGCC ATCGTCGCCG ATGTCGCGTT GACCGGCCTT
GGACGCGATG CCTGGCATCA GTTCAACGAT GGCGACATGC AGCGGATGGT GGCGATCTGC
CCGCTTGCCG GGACCGACCT GTTCCAACTT CAGGCGCCCA TCCCGCCGGA GGGCGAAGCC
GATCTCTCTG CCAAGGCGCT GGAGGGAATG ATACTGGATC GGACAGGCCG CAGCGATATC
CGGGTGCATT CCGTGGCCTG GGCTTCCGCC TATGCCATGA ACGCGCGGCT CGCCGAATGC
TACCGGGTCG GCCGGGCGTT CCTGGTGGGG GACGCCGCCC ATATCCATCC GCCGACCGGC
GGTCAGGGCC TGAACACCAG CGTGCAGGAT GCCTGGAACC TCGGGTGGAA GCTGGCAGCC
GTGCTGCATG GCGCGCCGGA TGGGCTGCTC GACACCTACG AGGCGGAGCG GCGCCCGGTG
GCCGAAGCGA TGCTGGGGCT TGCGACCGGC CTTCTTGACG CGATGAAACG CGGAATGACG
CGGCGCGGCC GCGAGACCCG CCAGCTCGAC ATCGGATACC CCGAGTCGCC GCTGGCCCTC
GATCCCTCCG GACGGCCCGG TATCCTGCTC GCCGGGGATC GCGCGCCCGA CGCTCCGCTA
CGCGGCGCTG CTGGACTGTC CCGCCGCCTG TTCGACCTGT TCAGCGGCCC TCACTGGACG
CTGATCGGCT TCGAGGCTGA GCGCGACATC ATTGCGCCGA GAGGCGGGCT GCACATCCAC
CGGGTCGGCC CCGGCCAGGA GCTTGAGGAC GAGGACGGCC ACCTGCACGC CGCCTATGGC
CTGGCACCCG GCGAATGGGT GCTGGTGCGT CCCGACGGCT ATGTCGCCGC GATCGTGTCC
ATGCAAGATG TGGCTCTTTT GGAGAGTTTC CTTGCCGAGG TAGGAGTGGC GGGAGCACGC
TCTGGAGACC TGAAATCGTA G
 
Protein sequence
MKAQNPVAVL ICGAGASGLT LAVDLARRGV AFRIIEKMDQ PFAGSRGKGI QPRTQEVFAD 
LGVLDRVVAA GGIYPSMREY RADGTWIEKD MAERHDPTPA EPYQIALMVP QFLTERVLRE
RLAELGHRVE FGTELVGFEQ DEKGVTARLV GPDGEETLTA RYLVGADGGR SFVRRTLGVE
FPGKTLGVRA IVADVALTGL GRDAWHQFND GDMQRMVAIC PLAGTDLFQL QAPIPPEGEA
DLSAKALEGM ILDRTGRSDI RVHSVAWASA YAMNARLAEC YRVGRAFLVG DAAHIHPPTG
GQGLNTSVQD AWNLGWKLAA VLHGAPDGLL DTYEAERRPV AEAMLGLATG LLDAMKRGMT
RRGRETRQLD IGYPESPLAL DPSGRPGILL AGDRAPDAPL RGAAGLSRRL FDLFSGPHWT
LIGFEAERDI IAPRGGLHIH RVGPGQELED EDGHLHAAYG LAPGEWVLVR PDGYVAAIVS
MQDVALLESF LAEVGVAGAR SGDLKS