Gene Pden_3031 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3031 
Symbol 
ID4581597 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp207773 
End bp208786 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content64% 
IMG OID639770357 
Producttransport system permease protein 
Protein accessionYP_916810 
Protein GI119385755 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGCAC GTTCCCCTAC GCTGACGTTT CTGGCGCTTC TGCTAGCGGT GAGCGTCATA 
TTCGCCTTCG GGATCGGGCG CTATCCGATC GGCACCCGCG ACCTGTTCGA TTTCGTTCTG
GCCGCGACCG GGCTGGGCCG GATGGAGCAG GACCGCTACG ACCTGTTGAG CAACCTGATC
CTCGACATCC GTGCGCCGCG CATCGCCGCA GCGGTGCTGG TCGGCGCGTC CCTGGCCACG
GCGGGGGCTG CGTTTCAGGC GGTGTTTCGC AACCCTCTGG TTTCGCCCGG CCTGCTGGGA
GTGCTGGCCG GTGCCGGTTT CGGTGCGTCC GTGGGCATCC TGATTTCGGG AAACTGGGTC
GTCGTGCAAC TGCTGGCCTT TGCCTGCGCC ATTCTGGCCG TGCTGTTCGC GCTCGGGATT
GCGAACCTGT TCGGCAATGC CTCGCTTGTG ATGCTGATCC TCGGCGGGAT CATCAGCGGC
GCGCTTTTCT CGGCGCTGCT GACGCTGGTC AAATATGCTG CCGATCCGGG CGATCAACTG
CCCGCGATCA CCTATTGGCT GATGGGCAAT CTCGGCACCG CACGTATCGA ACAATTGCGA
TGGGCCGCCT TGCCGGTGTT CGCGGGTATC CTGATCGTCT GGATGCTGGG CCGCGCGCTG
GACGCAATGT CGATGGGCGA CGATGAGGCC CATACGCTTG GCGTTCCGGT GGCGCTGATC
CGCTATGCCG TCATTGCCGT TGCGACGATG GTCTCGGCGA TCTCGGTGTC GATGGTGGGC
ATCATCGGCT GGATCGGCCT GATCATCCCG CATATCGCGC GGCTGATGAT CGGTCCGATG
AACATGCGCC TGATCCCCGC TTCGGCCCTG CTGGGAGCGT CCTTTCTGGT CGGTGCGGAC
ATCCTGGCGC GGTCGCTTTC GGGTATCGAG ATCCCCATCG GCATTGTCAC CGAGATCGTC
GGCATCCCGA TCTTCGTCCT CGTCCTGTCG CGCGTCCGCC GGGGCTGGAC ATGA
 
Protein sequence
MTARSPTLTF LALLLAVSVI FAFGIGRYPI GTRDLFDFVL AATGLGRMEQ DRYDLLSNLI 
LDIRAPRIAA AVLVGASLAT AGAAFQAVFR NPLVSPGLLG VLAGAGFGAS VGILISGNWV
VVQLLAFACA ILAVLFALGI ANLFGNASLV MLILGGIISG ALFSALLTLV KYAADPGDQL
PAITYWLMGN LGTARIEQLR WAALPVFAGI LIVWMLGRAL DAMSMGDDEA HTLGVPVALI
RYAVIAVATM VSAISVSMVG IIGWIGLIIP HIARLMIGPM NMRLIPASAL LGASFLVGAD
ILARSLSGIE IPIGIVTEIV GIPIFVLVLS RVRRGWT