Gene Pden_3027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_3027 
Symbol 
ID4581593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp202131 
End bp202469 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content67% 
IMG OID639770353 
Productalkylhydroperoxidase 
Protein accessionYP_916806 
Protein GI119385751 
COG category[S] Function unknown 
COG ID[COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 
TIGRFAM ID[TIGR00778] alkylhydroperoxidase AhpD family core domain 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGACA TCTCCATGCC CAAGGCCAGC GCCGCGCTTG GCGCGAAACG TCACGCGCTG 
GCGCCAGCCA TCGACGATGC CTTTCTGGCG CTGTCGAAGG TGGTCTTCGC CGACGGTGCG
CTGGACAAGC GCACCAAGCA GCTGATCGCG GTCGCCGTGG CCCATGTCAC GCAATGCCCC
TGGTGCATCG AGGGCCATGT CAAGGGCGCC CGCCGCGAGG GTGCCACCAA CGAGCAGATC
ATGGAGGCGA TCTGGGTCGC GGCCGAGATG CGCGCCGGGG CCGCCTATGC CCATGCCAAC
AAGGCGCTTG CGGTTCTGGA TGAGATCGAT GGCGCGTGA
 
Protein sequence
MADISMPKAS AALGAKRHAL APAIDDAFLA LSKVVFADGA LDKRTKQLIA VAVAHVTQCP 
WCIEGHVKGA RREGATNEQI MEAIWVAAEM RAGAAYAHAN KALAVLDEID GA