| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_3015 |
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| Symbol | |
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| ID | 4581581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008687 |
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| Strand | - |
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| Start bp | 187954 |
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| End bp | 193665 |
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| Gene Length | 5712 bp |
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| Protein Length | 1903 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639770341 |
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| Product | amino acid adenylation domain-containing protein |
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| Protein accession | YP_916794 |
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| Protein GI | 119385739 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1020] Non-ribosomal peptide synthetase modules and related proteins |
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| TIGRFAM ID | [TIGR01733] amino acid adenylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCTGA CCGCCATGCA GGCAGCCTAT TGGACCGGGC GCGATTGGAA GGGGCCGGGC
GGCGGCGTAT CCGCGCATCT GCATACCGAG TTCCAGCCGG CGGGGCTGGA GCCGCGGCGG
CTGGACCGCG CGGTGCGCGG GCTGTTCCGC CGGCACCCGA TGCTGCGGCT GCGGGTCACG
GCCGCGGGCC AGCAGGTGAT CCAGCCGCTA GACGACCGCC ACGCCTTGCG GCTTGACGAC
CTGCGGGAAC TGGCGCCGGA CCAGGCACAG GAACGGCTGG CCGCGACACG GCGGCGGATG
ACGCATCAGC GGCTGGACAT CGCCTCGGGC GAAGCGGCAG AGTTCCGGCT GAGCCTGCTG
CCCGGCGGCG AACAGCGGCT GCATATCGAC CTGGACATGA TCGCGGCCGA TCCGTCCTGC
TTCGGGCTGG TCATGGACGA CTTGGCCCGG CTTTACGAGG ATCCGGCCGG GATCGCTGCG
TCCGAGGAAC CCGAGAGCTG CTATTTCGAC TACCTGGCCC GGCTGCCCCC CGACCCGGCC
GAGGTGGCGG ACCGGGAATG GTGGCGGGCG CGGCTACGCG ACCTGCCGTC GCCGCCCTCG
CTGCCGCTGC GCGACCAGGC CGGCGCGCCG GAAAGCACCC GGATCTCGGC CCTGCTGCCG
CCGGCGCGGG CCGCGGCGCT GCGGGGGCTT GCGCGTGAAT TGCGGGTCAC GCAGACCGCG
CTTTACCTGG CGGTCTTTGC CGCCGTGCTG GCGCGGGCGA CGGGCGACCG GGCCTTTCGC
CTGACGCTGC CGGGCTTCTT CCGCGCCCCG GTGATGCGCG GCGCCTCGCG GCTGGTCGGG
GATTTCACCA ATATCCTGCC GCTCGGCCTG CGGGTCGGGC CCGAGGCCAC GCTGGCCGGA
CTGGCGCGCG AGGCAGGGCG CGAGATCGCC GAGGCGCTGT CGCATCAGGC CTGCCCCGGC
GTCGCCGTGC TGCGCGAGAT GTCACGCGGC GGCCAGGGCG TGGAATCCGC GCCGGTGGTC
TTTACCAGCG GGCTCGACCT GGACGGGGCG CAGCGCCAGC TGCTCAGCCC GCGCGTCGGC
CGGCTGTTCG GGCGGCTGGT CTGGAGCGTG TCGCAGGCGC CGCAGGTCGC GCTGGACGTG
CAGGTCGCCG CGCTGGCCGA GGGCGTGCTG CTGAATTGGG ACCTGCGGCT GGACGCGTTG
CCCGAGGACT GGGTGCGCGC CGGTTTCGAT GCCTGCCACG CGGCGCTGTG CCGGCTGGCC
GATGCGCCCG ATCTGGCGGC GGCGCCGCTG TCGGACTGGT TGCCAGCGCC GATGCGGATG
CGGCGGCTGG GCGAGCTGCA AAAGGCCTAT CTGCTGGGCC GCGAGGCCGA GCTGCCGCTG
GGCCGCACCG CCATGCAGGA ATATCGCTGC TATCGCGGCC CGCTGGATGC CGAAGCCCTG
GCGCGCCGGG CCGAGGCGCT GATCGAGCGG CATGAGGCGC TGCGCTGCCG GCTCGACCCT
GAATATTCGG CGCTGCGCGT GCTGGACGAA GCCGAACCGC CGCTGGAACG GATCGACCTT
TCGGATATGG GTGCCGATGA GGCCGAGGCA CGGCTGGCCG CCCTGCAGGA CGAGTTCGCC
CGCGCGCCGC TGCCGCTGGA CGGGCTGCTG TGGCGGCTGG TGCTGGTCGA GATGCCGCAG
CCCCGCGACC AGGCGCTGCT GGTCAAGATG GACGCCCTGC CGCTGGACGG CGCCGGGATC
GCGCAGGTCG TCGCCGAATT GCTGGCGCCC GAACTGCCCC CGGCCTGCGC CCTGCCCGCA
CCGCCCCTCG AACAGGCCGA CCGCGCCGCC GATGCCGCCT GGTGGCGCGC GCGTCTGGCC
GGCGTCGAGG GGCCGCCCTG CCTGCCCTGG CGGCAGCCGC TGGACGGCAT CGACCGCCCG
CGCTGGCGCC GCGACAGCCG CCGCATCCCG CGCGATCAGC TGGCGCGCCT GGCCCGGCTG
GCGGCGGCGC AGAAACTGAC CCGCAACAGC ATCGCCATGG CCGTGGTGCT GGAGGTGCTG
GCGCGCTGGA CCCCGGACCT GGCGCCCTGT GTCGCGGTGC CGGTGGCGCC GCCGCCGGGC
GGGGCGCTGG CCAACCGCTC GTCCTTCGTC GCCGTCGATT ATCGCGCCGA CCGGGGCAGC
TTCCTGGATC ATGCCCGCCG GCTGCAAGAG GACCTGTTGG AGGGAATGGC GCATCCCGGC
CTGTCGGGCA TCGGCCTCAG CCGGCTGCTG CTGTCGCAGA TGGGCGGTCG GATCGCGCTG
CCGGTGGTGC TGACCAACGG CATGGGCTGG GACCGGGTGC CCGCCGATGC CGGGCTGCGG
CTGGTGGACG GGCTGGTGCA GACCCCGCAG GTCGCGCTGG ACCTGCGGCT GGCGCTGGAT
GCGGAGGGTG CGCTGCTGCT GCAAGCCGAT CACGTCGAGC AGGCGCTGGA GCCTGCGGTC
GTCGGCGCGT TGCTGGACGC CGCCGCCCGC GCCTTCGCCG CGCTGGCCGA ACGGGACGAG
CTGACCCTGG CCGGCGCCGA TTTCCTGCCG CCGCCGCCCG CGGCCCCCGC CGGGGCGGAA
CATGCCGGCC CCGGCCATCT GGAGCGCATC GCGGCGCAGC TGTTCGACGG CGATCCCGAC
CGCACGGCCC TGATCTGCGA CACCCGCAGC ACCAGCTACG GCGCGCTTGG CCTGCGGGTG
CGGCGCGTGA TGGCCGGGCT GGCCGCGCGC GGGCTCGCGC CGGGCGACAT GGTCGCGATC
TGTCTGCCGC GCGGACCCGA GCATCTGGTG CTGACGCTGG CCTGCGCCTT CTCGGGGCTG
GTCTGGGTGC CCATCGACGC CGCCGCGCCG CCCGAGCGGC GCGACTACCT GCTGCGCAAT
TCCGCGCCGC GGCTGGTCGT GGCCGGGACC GACCTGCCCG GCTGGCCGCT GGCCTCGCCC
CGCACCCTCG AAGCGCATGA CCCGGCCCCG ATCCCGCAGG GACTGGCCGC GCTGTCCCGT
TCCGAAGCGG CGGCCTATTA CCTTTACACC TCGGGCACCA CCGGGCGGCC GAAATGCGTG
GTGCTGAACA ACCGCGCCAC CGCGAATGTC ATCGGCCATA CGCTGGATGC CTGGGGGATC
GGGGCCCAGG ACGCGGTGAT CTCGGTCACG CCGCTGCATC ACGACATGTC GGTCTTCGAC
CTGTTCGGCA CCCTGGCCGC CGGCGCGCGA CTGGTCATGC CCGCGCCGGC CGAGGAAAAG
GACGCCCTTG CCTGGAACCG TCTGGTGCGC GACCACGGCG TGACCGTCTG GTGCTCGGTC
CCCGCCATCG TCGAGATGCT GCTGGCCTGT GCGCCGGATG ACGGGCTGAC CTCGCTGCGG
CTGGTGGCGC AGGGCGGCGA CTACATCAAG CCGGCGGTGA TCGACCGGCT GCGCCGGCTG
CGGCCCGATG CGGCGCTGTG GTCGCTGGGC GGCCCGACCG AGACCACGAT CTGGAGCATC
TGGCACCGGA TCGGCCCCGA GGACGACCGC ATCATCCCCT ATGGCCGCGC CCTGCCCGGC
AACCGCTACC TGCTGCTGAA CCCGCAGGGC GAACCCTGCC CCGAGGGCGT GGCCGGCCGC
ATCCACACCA CGGGCGTGAA CCTGGCGCTC GGCTATCTGC GCGACGGCGC GCTGGAACAG
ACCGACTTCA CCGAGGTCGG GGGCATCCGC GCCTTTCGCA GCGGCGACCT GGGGCGGCTG
CGCGGCGACG GCACCATCCT GTTCGACAGC CGGGTGAACG GCTATGTCAA GGTGCGCGGC
GTGCGCATCT CGCTGGCCGA TGTCGAGGCC GAGCTGGCCG CCCATCCCGC CGTCGCGCAG
GCCCTGGTCG TGGACATTCC CGACGCGCGG GGCGAGAAGG TGCTGGCCGC GCTGGTCGCC
GGCCGCGATC TGCCCGAACC GGCCGCGCTG CGCGCCTTCC TGCGCGAACG GCTGCCGCAA
TCGCACCTTC CCGACCGCAT CCTTGCAATC CCGGCGCTGC CGCTGTCGGC CAACGGCAAG
CCCGACCGCC GCCGCGCGCG CCAGATCGCG GGCCAGCCCG GCCCCGAGCC GACCGCACCG
CCAGAAGCGC CAGGTGCCGA GCCGGCGGAC GCGCTGACGG GCCTGATCCT AGCCGCCTTC
CGCGAGGCGC TCGGCGCGCC CGGAATGGGG CCCGAGGACG ATTTCTTCGA CCATGGCGGG
CATTCGCTGG TCGCGACCCG GATCATCGGC AGGCTGCAGG CCGAGCATGG CATCGCCCTG
CGCTTCACCG ACATCTTCCG CCATCCGACC GCCCTCGCGC TGGCCGGGAT CGCCACCCGC
AGCGCGCCGG CCGCACCGAT GCCCGCAGCC GGGGACGACG CGGCCGGGCC CCAGGCGGCG
CCCCTGTCGC TGGCGCAGCA ATCGCTGTGG AAGGCCTATG CCGCCTTCGG CTATGGCGGC
ATCTTCAACC TGCCCTTTGC CCTGCGTTTC CCGACTCCGG TGGACGAAGC GGTCTTCGGC
CTGGCCTTCG GCGACCTGAT CCGCCGCCAT CCCGTGCTGC GCAGCCATTT CCGCGAGGAA
AACGGCACGC CGCTGCAAGA AGTGGTCCCG GTCGAGCGGC TGGGCGATTA TCGCTGGTTC
TGGACCAGCG CCGAGGCGGG CGAGGCAAAC CGCCGGACCG AGGCCGGCCA TGTCTTCGAC
CTTGCCCGCG AATTGCCGCT GCGGCTGCGC TTCTTCCGCG AGGGGGACGA GCAGGTGCTG
TCCATGCTGT TCCACCATAT CGTGCTGGAC GAATGGTCGC TGAACCTGCT GATGGACCAG
CTTGACCACG CCTATCGCCA GCGCGCGGCG GGGCTGGCGC CGGAATGGCC CGACCAACCG
CCGGGCTTCC ACCGCTTCGC CGCCGCGCAA AGGGCGGCGG ATACGGACCG CGCGCATCTG
GACTACTGGC TGGATCACCT GCGCGGCGCG CCGCGTGCCC GCCCGATCCT CGGCGCTGCG
CCGGGCGGAC AGGACCCGCA GGGCGGCTGG ACCCGGATCG ACCTGCCGGC CGAGGTCGCA
CGCGGGCTTT ACGCCACGGC GCGGCGCAAC GCGGCCTCGC TTTTCGCGAC GGCCTATGCG
GCGATCGGCG CGGCGCTGGG GCGGCTGGGC GGCATCGGCG ACCTGGTGAT CGGCACCTCG
GCCTCGGGGC GCAACGATCC GGCCTGGTTC GACACGGTGG GCTATTTCAC CACCATGACC
GCGCATCGGC TGGCGCTGGG GGCGCAGGAC ACGCCCGCCG CGCTGATCGC GCAGGTCCGC
GACCGCATCG CCCGGTCGCT GCCGCATTCC GAGGTCCCGC TGGACCTGGT GGGCGAGGCG
CTGACCGGCA ATCCCGTCAC CCGGCTGGAC GAGATGTTCG AGGTCTTCAT CCAGATCCAC
GCCCGGAACC GGATGAACGG CGCCATCGCG CTGATGGACG GCAGCCGCGT CGAATACCGG
CAGATCGACC CCGACAAGGC GGAATCGCTG CTGGGCCTGC AATTCGAGAT CGTCGAGGAC
GTGGCGGACG AGACCGCCGG CCTGCGCATC ATGCTAAGCC ATCGCGCCGA CCGCTACGGC
CCCGCCGAAA TCCGCCGGAT CACCGAAGCG GTCGAGGCGA TGCTGGCCCG CTTTGCACAG
CCGCAGGACG ATCAGCCGCT GGACGCCGGC GAGGCAAGCC CCAGATGCGC GGCCAGCGTC
TCTCCGGCAT AG
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| Protein sequence | MDLTAMQAAY WTGRDWKGPG GGVSAHLHTE FQPAGLEPRR LDRAVRGLFR RHPMLRLRVT
AAGQQVIQPL DDRHALRLDD LRELAPDQAQ ERLAATRRRM THQRLDIASG EAAEFRLSLL
PGGEQRLHID LDMIAADPSC FGLVMDDLAR LYEDPAGIAA SEEPESCYFD YLARLPPDPA
EVADREWWRA RLRDLPSPPS LPLRDQAGAP ESTRISALLP PARAAALRGL ARELRVTQTA
LYLAVFAAVL ARATGDRAFR LTLPGFFRAP VMRGASRLVG DFTNILPLGL RVGPEATLAG
LAREAGREIA EALSHQACPG VAVLREMSRG GQGVESAPVV FTSGLDLDGA QRQLLSPRVG
RLFGRLVWSV SQAPQVALDV QVAALAEGVL LNWDLRLDAL PEDWVRAGFD ACHAALCRLA
DAPDLAAAPL SDWLPAPMRM RRLGELQKAY LLGREAELPL GRTAMQEYRC YRGPLDAEAL
ARRAEALIER HEALRCRLDP EYSALRVLDE AEPPLERIDL SDMGADEAEA RLAALQDEFA
RAPLPLDGLL WRLVLVEMPQ PRDQALLVKM DALPLDGAGI AQVVAELLAP ELPPACALPA
PPLEQADRAA DAAWWRARLA GVEGPPCLPW RQPLDGIDRP RWRRDSRRIP RDQLARLARL
AAAQKLTRNS IAMAVVLEVL ARWTPDLAPC VAVPVAPPPG GALANRSSFV AVDYRADRGS
FLDHARRLQE DLLEGMAHPG LSGIGLSRLL LSQMGGRIAL PVVLTNGMGW DRVPADAGLR
LVDGLVQTPQ VALDLRLALD AEGALLLQAD HVEQALEPAV VGALLDAAAR AFAALAERDE
LTLAGADFLP PPPAAPAGAE HAGPGHLERI AAQLFDGDPD RTALICDTRS TSYGALGLRV
RRVMAGLAAR GLAPGDMVAI CLPRGPEHLV LTLACAFSGL VWVPIDAAAP PERRDYLLRN
SAPRLVVAGT DLPGWPLASP RTLEAHDPAP IPQGLAALSR SEAAAYYLYT SGTTGRPKCV
VLNNRATANV IGHTLDAWGI GAQDAVISVT PLHHDMSVFD LFGTLAAGAR LVMPAPAEEK
DALAWNRLVR DHGVTVWCSV PAIVEMLLAC APDDGLTSLR LVAQGGDYIK PAVIDRLRRL
RPDAALWSLG GPTETTIWSI WHRIGPEDDR IIPYGRALPG NRYLLLNPQG EPCPEGVAGR
IHTTGVNLAL GYLRDGALEQ TDFTEVGGIR AFRSGDLGRL RGDGTILFDS RVNGYVKVRG
VRISLADVEA ELAAHPAVAQ ALVVDIPDAR GEKVLAALVA GRDLPEPAAL RAFLRERLPQ
SHLPDRILAI PALPLSANGK PDRRRARQIA GQPGPEPTAP PEAPGAEPAD ALTGLILAAF
REALGAPGMG PEDDFFDHGG HSLVATRIIG RLQAEHGIAL RFTDIFRHPT ALALAGIATR
SAPAAPMPAA GDDAAGPQAA PLSLAQQSLW KAYAAFGYGG IFNLPFALRF PTPVDEAVFG
LAFGDLIRRH PVLRSHFREE NGTPLQEVVP VERLGDYRWF WTSAEAGEAN RRTEAGHVFD
LARELPLRLR FFREGDEQVL SMLFHHIVLD EWSLNLLMDQ LDHAYRQRAA GLAPEWPDQP
PGFHRFAAAQ RAADTDRAHL DYWLDHLRGA PRARPILGAA PGGQDPQGGW TRIDLPAEVA
RGLYATARRN AASLFATAYA AIGAALGRLG GIGDLVIGTS ASGRNDPAWF DTVGYFTTMT
AHRLALGAQD TPAALIAQVR DRIARSLPHS EVPLDLVGEA LTGNPVTRLD EMFEVFIQIH
ARNRMNGAIA LMDGSRVEYR QIDPDKAESL LGLQFEIVED VADETAGLRI MLSHRADRYG
PAEIRRITEA VEAMLARFAQ PQDDQPLDAG EASPRCAASV SPA
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