Gene Pden_2998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2998 
Symbol 
ID4581564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp171623 
End bp172477 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content74% 
IMG OID639770324 
Producthypothetical protein 
Protein accessionYP_916777 
Protein GI119385722 
COG category[R] General function prediction only 
COG ID[COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0475607 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCCC AACTGCACCT GTTCGACGCC CTCGCATGGC GACTGACGCA GGGGCTGCCG 
GGGTTGCGCA TGGGCGCCCA TGCCGGCCGG ATACGCGGCG CGGGCGAGAG TTTCGCCGAC
ATCGCGCCGC TGCTGGCGCA TCCCGACCCC CGGCGGCTGG ACCTGCGCCG CTCGATCACC
GACCCTCTGG GCGTGCTGCA TGTGCGGCGC TTCCAGACCC GCACCGACCT GCGGCTGCAT
GTGGCGCTCG ATGCCTCGGC CTCGCTGGGC GCGGTGGCTC ATGCCGACCG CGCGGGCCTG
GCGCGGCTGC TGGCCGCAGG CTTTGCGCAG GCCGCGCGGC GGGCGCGCGA CCCGTTCTCG
CTGACCGTCT GCGCCGGCGA CCGGGTGCTT CACGACCAGC CCCCGACGCG GCGCAGCCTT
GCCGCCGACC TGCTGGACCT GCCGCTGGCG CCTGCGGGCC GGGGCACGGC GGCGCTGGAG
GCCATGGCGC ATGACCTGCC GCAAGAGCGG ATCCTCGTGG TACTGATCTC GGATTTCGAA
CTGTCGCCGG ACGAATTGGC CGCACTGCTG GCCGCGCTGC GGCCGCGTCC CGTGCTGTCC
GTCTGGCTGC GCGACAGCGG CTTCGACGCG CCGTCGCCGC GCCTTGGCCT GGCCGAGCTC
TGCGACCCGG AAACCGGACG CCGCCGCACC GTGCTGACCA CGCCCCGCTG GGCGGCGCGC
CAAGCCCAAT TGCTGCGGGA CCGGCAGGCC GCCCTGCGCC GCATCCTGGC CGAGCACGGC
CTTTCGCCCA TCGAGATCAC CGACAGCATC GACGTGGCAG AGCTGGCCGC CTCGCTTTCC
GAGGCGCCGC TATGA
 
Protein sequence
MNAQLHLFDA LAWRLTQGLP GLRMGAHAGR IRGAGESFAD IAPLLAHPDP RRLDLRRSIT 
DPLGVLHVRR FQTRTDLRLH VALDASASLG AVAHADRAGL ARLLAAGFAQ AARRARDPFS
LTVCAGDRVL HDQPPTRRSL AADLLDLPLA PAGRGTAALE AMAHDLPQER ILVVLISDFE
LSPDELAALL AALRPRPVLS VWLRDSGFDA PSPRLGLAEL CDPETGRRRT VLTTPRWAAR
QAQLLRDRQA ALRRILAEHG LSPIEITDSI DVAELAASLS EAPL