Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_2991 |
Symbol | |
ID | 4581557 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008687 |
Strand | - |
Start bp | 164596 |
End bp | 166023 |
Gene Length | 1428 bp |
Protein Length | 475 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639770317 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_916770 |
Protein GI | 119385715 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4585] Signal transduction histidine kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.259312 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGCGC CGACCGAAGG CCTCGCCTTT CAGGCCTTTG GCCGCGCGAC GCGGGTGCGG CGGACCGTGC CGCTGCGCCG GATCGTGATG GGGCTGGCCT GCGCCGTCAG CCTGTCGCTG TGCCTGATCG TCTCGGCCAT CCTGATCGTC AACGCGCGTC AGGCGGTGCA GGAGGAAACC GAATCCGCCT TCCGGCTGGC GCATGAGGCC GTCGTGCGCC GCCTGCCGCC CAGCCATGGC GGCCGCGACA CCATGACCGA GGCGATCGGC CTTGCCGAAG AGATCGACGG GCTGCGCCAT GTCTCGGCGC GCATCCTCGA TCCCGAGGGC CAGCCGCTGC AACATCGCGC GCATGGCCAG CTCCGGTCCG AGGCGTCCGC TCCGCAGTGG TTCTCGGCCT TGATGACGCC GCCCCTGGTC GAGGCCCTGG TCCCCATCAC CCATTATCCG AACGTCTTGG GGATGCTGCG CGTCGCCGCC GATCCGACCG ACGAGATTGC CGAGGTGTGG GGCGATTTCA GCATCATCCT GCCGGTGCTG TTCCTGGCCG GGCTCGCCAT GGTGGGGCTG GCCTTTCTGA TGACGACGCT GCTGACGCGG CGCCTGCAGT CGGTGCAGGC CGCCATGGCG CAGATGCAGG ACGGTCGCCT GTCGGTGCGG GCACCCGACG ACCGGCTGAC CGAATTCGCC GACCTGGCCG CGGGGGTCAA CGCGCTGGCC TCGCATCTGC AGGCCGAGCA GGCCGAGAAC GACCTGCTGC AAGCCCGCCT GATCGGCAGC TCCGAAGCCG AGCGCTCGCG CATCGCGCTG GACCTGCATG ACGAGATGGG GCCGCAGCTT TTCGCCTTGC GGGCGGCCGT CAGCCACGCG CAGGCGATGA CCGCCGACCT GCCGGAACGG CCCGCCGCCC TGGACGAGAC GCTGGATGCC ATCGCCGGCC ATGCCTTGGA GGTCCAGAGA AGCGCCCGCA CCGCCATCAA CGACCTGCGC CCGATGCTGC TGGGCGAGGC CAGCCTGGCC GAGCTTCTGG CCGAACTCGT CACCGGGTTT CGCGATGTCG CCTCCGAAAC GCGGGTCGTG CTGGACGTCG ACCCGGAGGT CGAAGGCTCC AGCCCCGGCG AATTGGCGGA ACTGTCGATC TATCGCTTCG CCCGGGAAAG CGTGCTGAAT GCCATGCGGC ACGGGCGCGC GACCGTGGTT CGGGTCAGCC TGGACACCAT GCCCGACGAG CCCGGTCAGA TCGTCGTGCG CGTCACGGAC AACGGCAAGG GGCCGCAATC CGGCACCGGC AGGCCCACGC CCGGGTTCGG CCAGATCGGC ATCGAGGACC GCGCCCGCGC GCTTGGGGCG ACCTATCTGC CGCCGTGGCG GGACAACCGA CTGACCCATA CCGAACTGAG GATGCCACGC CCATGCAAGC TGCGCTGA
|
Protein sequence | MSAPTEGLAF QAFGRATRVR RTVPLRRIVM GLACAVSLSL CLIVSAILIV NARQAVQEET ESAFRLAHEA VVRRLPPSHG GRDTMTEAIG LAEEIDGLRH VSARILDPEG QPLQHRAHGQ LRSEASAPQW FSALMTPPLV EALVPITHYP NVLGMLRVAA DPTDEIAEVW GDFSIILPVL FLAGLAMVGL AFLMTTLLTR RLQSVQAAMA QMQDGRLSVR APDDRLTEFA DLAAGVNALA SHLQAEQAEN DLLQARLIGS SEAERSRIAL DLHDEMGPQL FALRAAVSHA QAMTADLPER PAALDETLDA IAGHALEVQR SARTAINDLR PMLLGEASLA ELLAELVTGF RDVASETRVV LDVDPEVEGS SPGELAELSI YRFARESVLN AMRHGRATVV RVSLDTMPDE PGQIVVRVTD NGKGPQSGTG RPTPGFGQIG IEDRARALGA TYLPPWRDNR LTHTELRMPR PCKLR
|
| |