Gene Pden_2967 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_2967 
Symbol 
ID4581534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008687 
Strand
Start bp138930 
End bp139730 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content70% 
IMG OID639770294 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_916747 
Protein GI119385692 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.00963503 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.212709 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGACG GAAACCCCGA ACCGCTGGTA CTGCGCAAGG ATGACGGTCC TGTCGCAAGG 
CTGATCCTGA ACAGCCCGAT GAACTACAAC GCGCTGTCCA CCGCGATGAT CGATACGCTC
TCAGATGCGC TGGACGAGAT CGGGGCGGAT GACGGCGTCC GGGTCGTGGT TCTGGCCGCG
CGCGGCAAGG CGTTCTGCGC CGGCCACGAC CTGCGCGAGA TGCAGGGCGC GCGCAATGAC
GAGGACGACG GCCGCGCCGC CTATGCGCGG CTGTTCTCGC GCTGCGCCGC GATGATGCAG
AAGCTGCCCG CCCTGCCCCA GCCGGTCATC GCCGAGGTGC AGGGCATCGC CACCGCCGCG
GGCTGCCAGC TGGTCGCAAG CTGCGACATG GCCGTGGCGG CCGAGGGCGT GCGCTTCGGC
GTGAACGGGG TGAATATCGG GCTGTTCTGC TCGACGCCGA TGGTGGCGCT GACCCGCGCC
ATTCCGCCGC GCGCCGCCTT CGAACTGCTG GTGACGGGCG AGTTCATGGA CGCCGCCCGG
GCGCGCGAGC TGGGCCTGGT CAACCGCGTC GCCCCGCCCG AGGCGCTGGA GGCCGAGACG
ATGGCGCTGG CCCGCAGCAT CGCCGCCAAG CTGCCCGCCG CCGTGCGCAT GGGCAAGCGT
GCTTTCCACG CGCAGCGCAA CCTGGGCCTT GCGGACGCCT ATGCGACGGC GGGCGCGGTG
ATCTGCGAGA ACCTGCTGCT GCCCGACACG GCCGAGGGCA TCCAGGCATT CCTGGAAAAG
CGTCCGCCGA ACTGGGATTA A
 
Protein sequence
MKDGNPEPLV LRKDDGPVAR LILNSPMNYN ALSTAMIDTL SDALDEIGAD DGVRVVVLAA 
RGKAFCAGHD LREMQGARND EDDGRAAYAR LFSRCAAMMQ KLPALPQPVI AEVQGIATAA
GCQLVASCDM AVAAEGVRFG VNGVNIGLFC STPMVALTRA IPPRAAFELL VTGEFMDAAR
ARELGLVNRV APPEALEAET MALARSIAAK LPAAVRMGKR AFHAQRNLGL ADAYATAGAV
ICENLLLPDT AEGIQAFLEK RPPNWD